Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1684 ATGGCTCCGAACCTGGAATGTCGGATGTACGAGGCGGAGTACCCGGAGGTGGACATGGCGGTGATGATACAGGTAAAGAACATCGCGGACATGGGGGCGTACGTGTCACTCCTGGAGTACAACAACATCGAGGGGATGATCCTGTTCTCGGAGCTCTCACGCCGTCGGATACGGAGCGTGAGCAGCCTGATCAAGGTTGGGCGCATTGAACCGGTGATGGTGCTGCGTGTGGACAAGGACAAAGGGTACATCGACCTCAGCAAGCGTCGTGTCTCTGAGGAAGACATCCAGGCCTGCGAGGAGCGATACAACAAGAGCAAGCTTGTCCACTCTATTATGCGCCACGTCGCCGAATCCCTCAACATCGATTTAGAGGAGCTGTACGTTCACATGGGATGGCCTTTATATCGCAAATATGGTCATGCTTTTGAGGCATTCAAAATAATTGTGACTGATCCTGATTCTGTTTTAAATACTCTCACCCGTGAAGTCAAGGAAGTTGGCCCTGATGGGCAAGAGGTGATGACGGTGGTGCCGGCTGTGACTGAAGAAGTGAAGGATGCTCTAGAGGCAATGCGGAAGGCTGAAGCTGCTGGAAATAATGACTGCCCTGTGAAAATTAAACTTGTTGCTCCCCCACTTTATGTGCTTACCACTCAGACCCTTGACAAGGAGCAAGGTATATTGGTTCTCAACAATGCCATTCCTTCTTGCACTGAGTCAATTGAACAACGCAAGGGTAAACTAGGGCTGAAGGAGGCACCTAGAGCGGTGAGTGAACGTGATGATAAATTGCTTGCTGAACACATGGCTAAGCTACATCAAGATAATGAGGAAGTCAGCGGTGACGAAGACAGTGAAGAGGAAGAAGATACCGGGATGGGTGAGGTTGATCTGGACAACGGTTCTGGGATAACAGAGTGA 924 0.5043 MAPNLECRMYEAEYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKDKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAESLNIDLEELYVHMGWPLYRKYGHAFEAFKIIVTDPDSVLNTLTREVKEVGPDGQEVMTVVPAVTEEVKDALEAMRKAEAAGNNDCPVKIKLVAPPLYVLTTQTLDKEQGILVLNNAIPSCTESIEQRKGKLGLKEAPRAVSERDDKLLAEHMAKLHQDNEEVSGDEDSEEEEDTGMGEVDLDNGSGITE* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1684 307 SUPERFAMILY eIF2alpha middle domain-like 91 161 IPR024054 -
Dod05g1684 307 PANTHER BNAC04G04870D PROTEIN 2 189 - -
Dod05g1684 307 PANTHER BNAC04G04870D PROTEIN 190 307 - -
Dod05g1684 307 MobiDBLite consensus disorder prediction 253 279 - -
Dod05g1684 307 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 190 307 IPR011488 GO:0003723|GO:0003743
Dod05g1684 307 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 2 189 IPR011488 GO:0003723|GO:0003743
Dod05g1684 307 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 163 IPR011488 GO:0003723|GO:0003743
Dod05g1684 307 Pfam Eukaryotic translation initiation factor 2 alpha subunit 183 224 IPR011488 GO:0003723|GO:0003743
Dod05g1684 307 Gene3D - 3 91 IPR012340 -
Dod05g1684 307 SUPERFAMILY Nucleic acid-binding proteins 7 89 IPR012340 -
Dod05g1684 307 SMART S1_6 16 89 IPR022967 -
Dod05g1684 307 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Dod05g1684 307 Gene3D EIF_2_alpha 182 291 IPR024055 -
Dod05g1684 307 MobiDBLite consensus disorder prediction 253 307 - -
Dod05g1684 307 Pfam S1 RNA binding domain 15 89 IPR003029 GO:0003676
Dod05g1684 307 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
Dod05g1684 307 SUPERFAMILY eIF-2-alpha, C-terminal domain 190 283 IPR024055 -
Dod05g1684 307 MobiDBLite consensus disorder prediction 280 296 - -
Dod05g1684 307 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 170 IPR024054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1684 Dod-Chr5 42129119 42132363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1684 2 307 Eukaryotic Initiation Factors Gene Family AT5G05470 70.588 4.38e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1684 K03237 - gmx:100815696 522.702