Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1682 ATGGAGGCTCCTGTGATCAACGAGTCCACATTCTCTTCTGCGAACCCTTCCTCTTACTCTCTCTCCGAGATTTGGCCCATCACCACCATCACTCTTCCCTTTGACTCCGACGCTGACCACTCCACCCTCACCCACACTCCCAATCACAGCAACAAGAGGAAAGTCTCCTCTTCCACCACCACTCCCAATCACTTGAATGATTGTTCTGGCAACAATAAGCATATAAAATTAGGAGCATCCTCTGAGGATAACGGTGCAGATGCGAGTTCGGTTGCTGCCGGTAACAAGTTAGCTCAACAAGGTGCCAAGCCTAAGCCTTCCGAAGCTCCTAAGCAAGACTACATACATGTGAGAGCGAGAAGGGGACAGGCTACCGATAGCCACAGTCTTGCTGAGAGAGCAAGGAGAGAAAAGATTAGTGAGAGGATGAAAATTCTTCAAGATTTAGTCCCCGGGTGTAACAAGGTAATTGGTAAAGCACTTGTCCTAGATGAGATAATCAATTACATACAGTCGCTGCAGCGTCAGGTTGAGTTCCTTTCAATGAAACTTGAAGCAGTTAATTCAAGATTTAACATGAGTCCAACTGTTGAATGTTTTCCTTCAAAAGATGTTGGTACTCAGCCATTTGACCTTGCTGGAATGATATTCGGATCACAAGCAACCAGGGGGTATGTTGAAGGATCACAACCTGGATGGCTGCATATGCAATTAGGTGGTGGTTTTGAGAGAACAGCATAA 741 0.4602 MEAPVINESTFSSANPSSYSLSEIWPITTITLPFDSDADHSTLTHTPNHSNKRKVSSSTTTPNHLNDCSGNNKHIKLGASSEDNGADASSVAAGNKLAQQGAKPKPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRFNMSPTVECFPSKDVGTQPFDLAGMIFGSQATRGYVEGSQPGWLHMQLGGGFERTA* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1682 246 Gene3D - 120 195 IPR036638 GO:0046983
Dod05g1682 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 173 IPR011598 GO:0046983
Dod05g1682 246 MobiDBLite consensus disorder prediction 41 96 - -
Dod05g1682 246 SMART finulus 129 179 IPR011598 GO:0046983
Dod05g1682 246 CDD bHLH_AtBPE_like 113 192 - -
Dod05g1682 246 Coils Coil 170 190 - -
Dod05g1682 246 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 50 245 IPR024097 GO:0006355
Dod05g1682 246 PANTHER BNAC05G07950D PROTEIN 50 245 - -
Dod05g1682 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 193 IPR036638 GO:0046983
Dod05g1682 246 MobiDBLite consensus disorder prediction 41 111 - -
Dod05g1682 246 Pfam Helix-loop-helix DNA-binding domain 127 174 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1682 Dod-Chr5 42087933 42091996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1682 1 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 47.569 1.91e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod05g1682 HLH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1682 - - gmx:100799646 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1682 05 42087933 42091996 Dod05g1682 05 42087933 42091996 ECH