Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1676 ATGGTATCGACATCCCAGAAAAAAAGCCTTCACTCCCTCATGGCAGCTAACCTCAGCAAGCTCACCATACCATCTTCCTCTTCCGACGGTCCATCCACCAACGACCAAGATTTCGACTTTTCCCATGTCTTCGATCCCAACAACCCATCCCCATCCACTTCTGCCATGCCCATGAGCCCTCACGTGATCCACAGTAGGTCCCACTCCCTCGTGGGTCCCTCCCCCCGCGTCGCCCCTTCCTCCAACCCTCTCGTCCTCGTCAACGAGCTCTGTTCCACTTCCCAGAGCGAGGAGGAGGAGGACGAACCTGATGATGAAAAGCAAGTGCCAGTGACCGTGGCTGAGAAATTGGGCCCCAGAATTGGGCCTGGTGATTTCGAGATTCTGAGAGTTGTGGGCCAGGGGGCGTTTGGGAAGGTGTTTCTGGTGAGGAGGAGGAAGAAGAAGAAGAAGGAGGGAGAAGAAGAGTGTTGGGATGGGGATGGGGATGATGGGGTTTTTGCGATGAAGGTGATGAGGAAGGAGACTATAATAAAAAAGAACCATGTGGATTACATGAGAGCTGAGAGAGATATCCTCACTAAAGTTGTTCATCCTTTCATTGTTCAGCTCCGATACTCTTTCCAGACCAAATCTAAATTATATTTGATCTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCATCTGTATCGGCAGGGGATCTTTAGTGAGGATCAGGCAAGGATATACACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAATGGCATCGTGCATCGGGATCTTAAACCTGAAAACATACTTATGGATGCTGATGGGCATGTGATGCTAACTGATTTTGGATTGTCAAAAGAAATTGACGAATTGGGCAGGTCCAACTCTATGTGTGGGACCACAGAATATATGGCTCCAGAAATCCTACTGGCTAAAGGCCATAATAAGGATGCTGATTGGTGGAGTGTTGGTATTCTATTGTATGAAATGCTAACAGGGAAGGCGCCATTTACACACACTAACAGAAAGAAGCTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCATTCGTTTCCACTGAAGCTCACTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCATCAACAAGGTTAGGAAGTGGGCCAAATGGAGATGACCAGATCAAAAGTCATAAATGGTTTCGATCAATCAACTGGAGAAAATTGGAGGCAAGAGAACTGGAACCAAAGTTCAAACCAGATGTGTCTGGAAAAGACTGTACAGCTAATTTTGACCAATGCTGGACAGCAATGCCTCCTGATGACTCACCAGCTTCCACACCTACGGCAGGCGACCATTTCCAGGGCTATACATACGAGGCACCAAACCCTTGGCTTTCATCTAGATAG 1398 0.4685 MVSTSQKKSLHSLMAANLSKLTIPSSSSDGPSTNDQDFDFSHVFDPNNPSPSTSAMPMSPHVIHSRSHSLVGPSPRVAPSSNPLVLVNELCSTSQSEEEEDEPDDEKQVPVTVAEKLGPRIGPGDFEILRVVGQGAFGKVFLVRRRKKKKKEGEEECWDGDGDDGVFAMKVMRKETIIKKNHVDYMRAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDADGHVMLTDFGLSKEIDELGRSNSMCGTTEYMAPEILLAKGHNKDADWWSVGILLYEMLTGKAPFTHTNRKKLQEKIIKEKVKLPPFVSTEAHSLLKGLLQKDPSTRLGSGPNGDDQIKSHKWFRSINWRKLEARELEPKFKPDVSGKDCTANFDQCWTAMPPDDSPASTPTAGDHFQGYTYEAPNPWLSSR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1676 465 ProSiteProfiles Protein kinase domain profile. 126 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1676 465 PANTHER RIBOSOMAL PROTEIN S6 KINASE 5 464 - -
Dod05g1676 465 Pfam Protein kinase domain 126 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1676 465 Gene3D Transferase(Phosphotransferase) domain 1 221 416 - -
Dod05g1676 465 MobiDBLite consensus disorder prediction 434 465 - -
Dod05g1676 465 MobiDBLite consensus disorder prediction 21 82 - -
Dod05g1676 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Dod05g1676 465 SMART pkinase_C_6 398 457 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod05g1676 465 ProSiteProfiles AGC-kinase C-terminal domain profile. 398 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod05g1676 465 MobiDBLite consensus disorder prediction 21 60 - -
Dod05g1676 465 Gene3D Phosphorylase Kinase; domain 1 125 440 - -
Dod05g1676 465 SUPERFAMILY Protein kinase-like (PK-like) 124 452 IPR011009 -
Dod05g1676 465 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 464 - -
Dod05g1676 465 SMART serkin_6 126 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1676 465 Pfam Protein kinase C terminal domain 418 455 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1676 Dod-Chr5 42027347 42031596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1676 34 458 AGC Kinase Gene Family AT3G08720 58.072 3.97e-178 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Dod05g1676 Pkinase 1.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1676 K04688 - gmx:100798259 676.011