Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1669 ATGTCAGCCCCTAGCCATGCATTTGCAACGGCTGCGGCTGCTACAGCCGCTGCTATGCTACTTATTGCTTGGATTTTCTTTTATTTCTTCCAAAGATTTTCTCGTTCTGGATACCATCTTAGACAGAGAGTTGCAGCAAGTTTTCGGAGAGATGCAGGAGTGAACCATGAAGGTATGAAGAAAGTTGGTAGTAACATGAAAGGATTACTTGTTGAAGAAAATGGGATTGATATTCTGTATATGATGCATACAGAAGGAAGGCAATTCAAAACTAGATTCCCAAATGGAGTATTTAATCCTAGTTATGAAGATAATGAAGAAGAAAAGAGAATAGTTGCAATGGTCCAAAGAACCATACCACATGAGACTCAGGAGGCCCCACTGCTATGTGAACAAGGCTTGGTCGATCATGAGGATCTAGTTAAACCAGTTTCTTCACCAATGATTCTTGAGAAGAAAACTCAACCTCCTCCTCCTCCTCCTCCACCACCACCACTTTCCCCTCCAAGAAAGGAAGTTCCAAAAGCACCACCTTTACCTTGTGCAACATCATCTCTGAAGGCTAGTGGCTTCATTTCATCATTAAAACCCCCACCACCACCTAAAGGGAAAGCCAACATAGGAGAGAGCTCAAGAGAGAAGGGTGCTGGCCAAACAAGACTTAAGCCTCTACACTGGGATAAGGTTGTAGCTGATGTTGATCATTCAACTGTGTGGGATTGCATCAATGATGGCTCTTTCCGGTTTGATGATGAACTCATGGAAACACTGTTTGGATATTCAACCAACAATCAAACTCATGAAAGAAATAGGTGTCTTGCAAGTTCAGCTAAGTCCTACTCGAACACATCTGCTCAGTTATTCCTTCTGGACCCTCGAAAATCCCAAAACACAGCAATTGTGCTAAGATCTCTTGCGATTTCTAGCAAGGAAATCAAGGATGCACTCCTTGATGGCCAAGGACTCAATGTTGACACACTTGAAAGACTCACTAAGATAGCTCCTAACCATGAAGAAGAAGCCAAAATCATCCAATTCAGTGGCAATCCAGATAAACTTGCTGATGCTGACTCATTCCTCTACTACATCCTGAAAGCAGTTCCAACAGCATTTGTTCGTCTGAAAGCAATGCTTTTCAGATCAAATTATGACTGTGAAGTTGTTCAGCTTAAAGAACACCTACAGACTCTTGAAATGAGCTGCAAAGAGATGAGTACTAGTGGTCTGTTATTGAAGTTCCTTGAGGCCATTCTCAAAGCCGGAAACCGGATGAATGCCGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTAAGCGCTCTTAGAAAGCTTCCTGAAGTAAAAAGCAAAGATGGGAAGACTAGTTTACTGCACTTCATTGTGGAGCAGGTTGTTCAATCGGAAGGAAGACGGCAAGCAATCAATCAAGACCATAACCTTCACAGAATCAGTGGTGAAATAAGCAACACCAGTCGACCACATTCAGATACCCTTTTACAGCATAAGACAGAGAAAGATTTTCTAATGCTTGGTTTGCCCCCAGTGTTAGGAGGGATAAGGGATGAGTTATCTGAAGTAAAGAAAGCAGCTAGCATTGAGCATCAGAGTTTCATCAGCATGTTCTCCACTCTCAATGCTCATGTTACTGAAATTCAACAGATTATAACATGCTGTGGCAACAGTGAGAGAGATGGATTTATCAAGGAAATGAAAGGGTTCCTAGAGGAATGCAAGGAGGAGCTTAAAGTGGTGGAAGAAGACCAGATCAGGATCATGGAGCTTGTAAGGAAAACCAACGAGTATTATCTAGGAGGAGGATCCAAAGACAACATGCCAAACCCCTTTGAACTGTTTGTTATAGTAAGAGACTTTGTTGACATGGTACATGAAGTTTGCATGAATCTTAAAAGAAAGCTAGAAAAGAAGAATGTAGGAGGAGAAGCTCTATCAACACCACCTCTTTCACCATCAAAGAAAGCACCCCTTAAGTTTCCGAACTTTGATTTACATTTTCTCTCAAGTATGTCATCAGCAGCATCTTCCACCCTATTATCAGATGATGATTTCTGA 2070 0.4188 MSAPSHAFATAAAATAAAMLLIAWIFFYFFQRFSRSGYHLRQRVAASFRRDAGVNHEGMKKVGSNMKGLLVEENGIDILYMMHTEGRQFKTRFPNGVFNPSYEDNEEEKRIVAMVQRTIPHETQEAPLLCEQGLVDHEDLVKPVSSPMILEKKTQPPPPPPPPPPLSPPRKEVPKAPPLPCATSSLKASGFISSLKPPPPPKGKANIGESSREKGAGQTRLKPLHWDKVVADVDHSTVWDCINDGSFRFDDELMETLFGYSTNNQTHERNRCLASSAKSYSNTSAQLFLLDPRKSQNTAIVLRSLAISSKEIKDALLDGQGLNVDTLERLTKIAPNHEEEAKIIQFSGNPDKLADADSFLYYILKAVPTAFVRLKAMLFRSNYDCEVVQLKEHLQTLEMSCKEMSTSGLLLKFLEAILKAGNRMNAGTSRGNAQGFNLSALRKLPEVKSKDGKTSLLHFIVEQVVQSEGRRQAINQDHNLHRISGEISNTSRPHSDTLLQHKTEKDFLMLGLPPVLGGIRDELSEVKKAASIEHQSFISMFSTLNAHVTEIQQIITCCGNSERDGFIKEMKGFLEECKEELKVVEEDQIRIMELVRKTNEYYLGGGSKDNMPNPFELFVIVRDFVDMVHEVCMNLKRKLEKKNVGGEALSTPPLSPSKKAPLKFPNFDLHFLSSMSSAASSTLLSDDDF* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1669 689 SUPERFAMILY Formin homology 2 domain (FH2 domain) 156 641 - -
Dod05g1669 689 SMART it6_source 211 643 IPR015425 -
Dod05g1669 689 PANTHER FORMIN-LIKE PROTEIN 3 684 - -
Dod05g1669 689 PANTHER FORMIN-RELATED 3 684 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod05g1669 689 Pfam Formin Homology 2 Domain 216 628 IPR015425 -
Dod05g1669 689 Coils Coil 567 587 - -
Dod05g1669 689 MobiDBLite consensus disorder prediction 152 176 - -
Dod05g1669 689 MobiDBLite consensus disorder prediction 150 221 - -
Dod05g1669 689 Gene3D Formin, FH2 domain 234 647 IPR042201 -
Dod05g1669 689 ProSiteProfiles Formin homology-2 (FH2) domain profile. 211 654 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1669 Dod-Chr5 41933151 41935448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1669 11 686 FH2 protein (formin) Gene Family AT1G70140 38.122 6.16e-148 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1669 - - gsj:114409782 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1669 05 41933151 41935448 Dod05g1669 05 41933151 41935448 ECH