Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1665 ATGGAGGTTTTGAGGCAGAATTTGCCGGAGAAGCTTATGGAGTCACCTACAGGTGCAAGGGAACTGCACGTTCTAGCTGTTGATGATAGCCTTGTGGATCGAAAGGTCATTGAGCGCTTGCTGAAGATATCTTCTTGCAAAGTGACGGTTGTGGAGAGTGGAACTAGAGCTCTTCAGTATTTGGGGTTGGATGGAGAGAAGAGCTCCCTTGGCTTTGATAGTGTGAAGGTTAATCTGATAATCACTGATTATTCCATGCCGGGGATGACAGGGTATGAACTGCTTAAGAGGATCAAGGAGTCATCTGTTTTTAGAGAGATTCCAGTGGTGATCATGTCATCGGAGAATATCTTGACTCGAATTGATAGGTGCCTGGAGGAAGGGGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTGTCAGATGTAAGACGCTTAAAAGATTTCATCATGAGAGGTGAAGTGAAGGATGGAGAGAAAAGATCCCACAAAAGAATCAGAACAGATGATTGCAGCCCATCATCCCTATCAACTCCAATCTCCCCACCAATTACTCATCCTTATGATCCATCATCATCATTGTCACCATCCACCTTGTCCTCTAAGAAGTCTAGATTGTGA 618 0.4466 MEVLRQNLPEKLMESPTGARELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGEKSSLGFDSVKVNLIITDYSMPGMTGYELLKRIKESSVFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVRRLKDFIMRGEVKDGEKRSHKRIRTDDCSPSSLSTPISPPITHPYDPSSSLSPSTLSSKKSRL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1665 205 ProSiteProfiles Response regulatory domain profile. 23 150 IPR001789 GO:0000160
Dod05g1665 205 CDD REC_typeA_ARR 24 145 - -
Dod05g1665 205 SMART REC_2 22 146 IPR001789 GO:0000160
Dod05g1665 205 SUPERFAMILY CheY-like 21 146 IPR011006 -
Dod05g1665 205 Gene3D - 22 174 - -
Dod05g1665 205 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 205 IPR045279 GO:0009736
Dod05g1665 205 Pfam Response regulator receiver domain 24 143 IPR001789 GO:0000160
Dod05g1665 205 MobiDBLite consensus disorder prediction 170 205 - -
Dod05g1665 205 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 8 205 - -
Dod05g1665 205 MobiDBLite consensus disorder prediction 157 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1665 Dod-Chr5 41920568 41923147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1665 22 164 Response Regulator Gene Family AT3G48100 77.083 4.73e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod05g1665 Response_reg 2.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1665 K14492 - gmx:100796843 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1665 05 41920568 41923147 Dod09g0331 09 5006930 5009468 PCT