Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1648 ATGGGTGCTATGGGAGTGAGAAGCTATTTGCTGGAATGGACTCCATTTGTGGCCATGGTGATTTTGGAGTGCCTTGACGTGGGGTTGACCACATTGAGCAAAGCAGCCATGTCCAGAGGGATGAGCCACTTTGTCTTTGTTGTCTACTCAAATGCTCTTGCCACTTTCATACTCCTCCCTGTTTCTTTCATCTTCAACAGAACAACTAGGCCACCCCTCACTTTCTCCCTTCTTGGCAAATTCTTCTTCCTCGGCCTTGTTGGCATAACTGTGATGCAGAATTGTGTTTTCACCGGCATAAGCTATAGCTCGCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCTGCAATTGCTTTTGTGCTAGCAGTCATCTTCAGGATGGAGAAGCTTGATATTAGAAGCTCAGTAAGCCAGATCAAAATCGTGGGAGCAGTGCTGTCAATATCAGGAGCATTAATCGTGACCCTTTACAAGGGCAGTCCCATTGGTGGCTTACAAATTCAACCTTCTCCATCACAACCATTCCCACTAATGTTGCCAGAAAGTGCTAGTAACTGGGTCATGGGGGGTATCTTCCTTGCCATGGCCTCTACATCTCTTGCAATCTGGAATATTGCTCAGGCAGCAATTATCAAAGGATATCCAGCTCAGTTGACCATAGTAGCCTTCTATTGCCTGTTTGGAACCATCCAATCTGCAATAGTTTCTCTGATCACAGTCAAAGACCCCAATGCCTGGAAACTAAGTCTTGAAATTGAACTCGTCTCCATATTCTACTCAGCTACTTTCGGAAGTGTGGTGACATTTTCTGTGCTGACATGGTGCATAAATAGAAAAGGGCCTGTATTTGTTACCATGTTCAAGCCAGTGGGGATTGCCACTGCTGCCTTCACGAGTGTTATCTTCCTTGGTGACACACTCCATGTTGGGTGTGTAATTGGTGCACTAGTAATCGTCATTGGATTTTACACAGTACTGTGGGCACAATCCAAAGAGGGAACTGGAGAAAAAGGCCTCAATGACGATAGACTATCATCCCCGTCTGCACAAGCGAGTCCTCTACTAGAGTCACCATGA 1080 0.4593 MGAMGVRSYLLEWTPFVAMVILECLDVGLTTLSKAAMSRGMSHFVFVVYSNALATFILLPVSFIFNRTTRPPLTFSLLGKFFFLGLVGITVMQNCVFTGISYSSPTLGSAMSNLTPAIAFVLAVIFRMEKLDIRSSVSQIKIVGAVLSISGALIVTLYKGSPIGGLQIQPSPSQPFPLMLPESASNWVMGGIFLAMASTSLAIWNIAQAAIIKGYPAQLTIVAFYCLFGTIQSAIVSLITVKDPNAWKLSLEIELVSIFYSATFGSVVTFSVLTWCINRKGPVFVTMFKPVGIATAAFTSVIFLGDTLHVGCVIGALVIVIGFYTVLWAQSKEGTGEKGLNDDRLSSPSAQASPLLESP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1648 359 Pfam EamA-like transporter family 22 156 IPR000620 GO:0016020|GO:0016021
Dod05g1648 359 Pfam EamA-like transporter family 190 327 IPR000620 GO:0016020|GO:0016021
Dod05g1648 359 PANTHER WAT1-RELATED PROTEIN 12 354 - -
Dod05g1648 359 PANTHER WAT1-RELATED PROTEIN 12 354 IPR030184 GO:0016021|GO:0022857
Dod05g1648 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 331 - -
Dod05g1648 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 159 - -
Dod05g1648 359 MobiDBLite consensus disorder prediction 342 359 - -
Dod05g1648 359 MobiDBLite consensus disorder prediction 335 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1648 Dod-Chr5 41626774 41629441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1648 4 358 Nodulin-like Gene Family AT3G28050 45.232 4.99e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1648 - - ccaj:109809148 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1648 05 41626774 41629441 Dod05g1648 05 41626774 41629441 ECH