Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1638 ATGCTCGCCATTTTCTATCTTGTTGCAAGTCGAATTCTTGGCTTAAAATATGAATCCAAAAGGGGTTACATCGAACTTGAATACTTTGGCCGAACCATATTCATTAAAATTTTGCCGATAGGGATTCATATGGGTCGACTTCAATCTGCTTTAGATCACCCTTCTTCTTTAGTCAAAGTCAGAGAAATCTATGAGAAATTTAAAGGGAAAAAACTTATTCTTGGTGTTGATGATATGGACATATTTAAAGGTATCAGTCTAAAGCTCTTAGCCATAGAACAACTCCTTCAGGAGTATCCAGAATTGCAAGGTGAACTAGTACTGGTCCAAATTGTAAATCCACCAAGGAGTACCGGCAAAGATGTCGAGGAAGCAAAGGAAGAGACATATGTTACTTCCCATAGGATAAATGAGAGGTTTGGTTTGCCGGGTTATGAACCTGTCATCATCATTGATCATCCTGTTCCTATCTATGAGAAGACTTCCTACTTTGCTTTGGCAGAATGTTGCATTGTGAACGCAGTGAGGGATGGCATGAATTTGGTTCCGTACAAGTACATTGTTTGTAGGCAGCGGAGTCCTAAAGTGGATGAAGCTTTAGGTATTGCTTCTGAGTCCCCTCGTACAAGTGCACTTGTTGTTTCTGAGTTCATAGGTTGCTCACCATCTCTTAGTGGGGCAATCAGGGTGAATCCGTGGGACATTAATGGCGTAGCAGATGCATTGAATTTGGCCATCAATATGACTAGTGGAGAGAAACAGTTGCGACATGCAAAACACTATCGATATGTTAACTCTCATGATTTAGCTTACTGGGCTCGAAGTTTTTTGCAACATCTAGAGCACTTGTGCAAGGATCACTATAGTAAACATTGCTGGGGGATTGGCCTGGGCCTGAGTTTCAGAATCTTGTCCCTTTCTCCTAGTTTCAGGAAGCTGTCCTTAGACCATATTGTCTCTGCATATAAAAGGACAAATTGCAGGGCACTTTTTTTGGATTTTGATGGTACAATTGTATCTCGAGCCTCCATTGGTAGAAGCCCCACTCCTGAAGTCATAACTGTTCTAAATAACATTTGCAGTGACCCTAACAACACTGTGTTTATAGTAAGTGGCAGAGGAAAAACCATATTGAGTGAATGGTTTGATCAGTGCGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTGTAAGGTGGGGTCGACAATCAACTTGGCAAATGAGTCATATATGTACAAATTTTTGTTGGAAAAGGATTGCTGAACCTGTGATGAGATTGTATACTGAGGCAACGGATGGCTCCTATATAGAGACCAAAGAGAGTGCGTTGGTATGGCACTATTATGATGCTGATCCTGATTTTGGATCTTGGCAAGCCAAGCAGGTGTTGGATCACCTTGAAAGTGTACTTGCAAATGAGCCTGTAGTTGTTAAGAAGGGAAAGCATATCATTGAGGTCAAGTCACAGGGGATTACCAAAGGTTTAGTTGCAGAGGAAGTTCTGTCTACAATGACCAGGAACGGTAAATCGCCAGATTCGTAA 1545 0.4136 MLAIFYLVASRILGLKYESKRGYIELEYFGRTIFIKILPIGIHMGRLQSALDHPSSLVKVREIYEKFKGKKLILGVDDMDIFKGISLKLLAIEQLLQEYPELQGELVLVQIVNPPRSTGKDVEEAKEETYVTSHRINERFGLPGYEPVIIIDHPVPIYEKTSYFALAECCIVNAVRDGMNLVPYKYIVCRQRSPKVDEALGIASESPRTSALVVSEFIGCSPSLSGAIRVNPWDINGVADALNLAINMTSGEKQLRHAKHYRYVNSHDLAYWARSFLQHLEHLCKDHYSKHCWGIGLGLSFRILSLSPSFRKLSLDHIVSAYKRTNCRALFLDFDGTIVSRASIGRSPTPEVITVLNNICSDPNNTVFIVSGRGKTILSEWFDQCENLGIAAEHGYFVRWGRQSTWQMSHICTNFCWKRIAEPVMRLYTEATDGSYIETKESALVWHYYDADPDFGSWQAKQVLDHLESVLANEPVVVKKGKHIIEVKSQGITKGLVAEEVLSTMTRNGKSPDS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1638 514 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 5 513 IPR001830 GO:0003824|GO:0005992
Dod05g1638 514 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 285 - -
Dod05g1638 514 TIGRFAM T6PP: trehalose-phosphatase 328 512 IPR003337 GO:0003824|GO:0005992
Dod05g1638 514 SUPERFAMILY HAD-like 328 504 IPR036412 -
Dod05g1638 514 Pfam Trehalose-phosphatase 331 513 IPR003337 GO:0003824|GO:0005992
Dod05g1638 514 Pfam Glycosyltransferase family 20 5 281 IPR001830 GO:0003824|GO:0005992
Dod05g1638 514 Gene3D - 327 442 IPR023214 -
Dod05g1638 514 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 5 513 - -
Dod05g1638 514 Gene3D Glycogen Phosphorylase B; 45 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1638 Dod-Chr5 41565475 41568151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1638 5 513 Trehalose Biosynthesis Gene Families AT1G23870 66.208 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1638 K16055 - gmx:100808800 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1638 05 41565475 41568151 Dod05g1638 05 41565475 41568151 ECH
Dod05g1638 05 41565475 41568151 Dod09g0307 09 4724072 4731426 PCT