Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1630 ATGAAGAAACCTATCAGTAGAGGTGATTCGTCCAAACTTGATAGGAAAACCATCGAAAAGAACCGCAGAATTCACATGAAAGCTCTCTGCTTAAAGCTTTCATCTATCATTCCTCCCAACTACATCAAACTCACCAAGGACATGCCATCACAGCTGGAGCAGCTGGATCTTGCAACCACGTACATAGAGCATCTGAGAGAGAGAATAAACACATTGAAGGGGAAGAAGGAGGAGGCCATGAACACGATGACGAGGTCAAACGCTAACCAAACAAATGAGAGAACTAATTTCAATAACAACATTGGATCATCATCGGAATTGCCCTTACTTGAGATGAGAGACTTGGGTTCCGGCATAGAAGTGATGTTGGTAAGTGGGTTGAACAACAAGAACTTCATGCTCTGCGAAGTAATTGGTGTCATTGAGGAAGAAGGTGCCGAAGTTGTCGCCGCAAACTACTCTGTTCTTGGCGATAAGGTTTTTTACACTGTTCACGCACAGGTTAAAATATCAAGGGTTGGCGTAGACACAACGAGGGTATATCAGAGGCTTCACGAGTTGATTGCACCACTGGGTCCAGAAAACTGGGGGTTAGAAGAACCATACTATTATTACTAG 618 0.4369 MKKPISRGDSSKLDRKTIEKNRRIHMKALCLKLSSIIPPNYIKLTKDMPSQLEQLDLATTYIEHLRERINTLKGKKEEAMNTMTRSNANQTNERTNFNNNIGSSSELPLLEMRDLGSGIEVMLVSGLNNKNFMLCEVIGVIEEEGAEVVAANYSVLGDKVFYTVHAQVKISRVGVDTTRVYQRLHELIAPLGPENWGLEEPYYYY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1630 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 65 IPR011598 GO:0046983
Dod05g1630 205 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 188 IPR015660 GO:0003700|GO:0006357
Dod05g1630 205 PANTHER TRANSCRIPTION FACTOR BHLH162 9 188 - -
Dod05g1630 205 Coils Coil 62 82 - -
Dod05g1630 205 Gene3D - 5 82 IPR036638 GO:0046983
Dod05g1630 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 83 IPR036638 GO:0046983
Dod05g1630 205 Pfam Helix-loop-helix DNA-binding domain 15 66 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1630 Dod-Chr5 41436358 41438009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1630 8 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 33.880 8.15e-25 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod05g1630 HLH 0.00018 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1630 - - gmx:100811485 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1630 05 41436358 41438009 Dod09g0297 09 4552021 4553816 PCT