Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1624 ATGAAGAAGAACTTCTACTGGTTCAAGGAGATTTCTAACAACGTGAGGTCAGGGAGGAGGCTGTCACTCGGGGAATACAAGAGAGCAGTGTCATGGTCAAAGTATATTGTGTCCTCTGGTGCTGCTATAAAGGGGGATGGAGAAGAGGAATGGAGTGCTGATCTGTCTCAGCTGTTCATTGGTTCCAAGTTCGCTTCTGGGAGGCATAGCAGGATCTATAGAGGAATCTACAAGCACATCGATGTGGCAATCAAGCTTGTGAGCCAACCAGAGGAGGATGAGGACTTGGCTGTTTTGCTTGAGAAGCAGTTCACTTCCGAGGTTGCCTTGCTCTTTCGCTTGCGCCATCCAAATATCATTACTTTTGTTGGAGCTTGCAAGAAACCTCCTGTCTTTTGTATAATTACTGAATACTTGGCTGGGGGCTCATTGAGAAAATACCTGCATCAGCAAGGACCACATTCACTTCCTCTTGAACTTGTTCTGAAACTAGCCTTAGACATTGCCCGGGGTATGCAATATCTTCATTCTCAGGGCATACTTCATAGGGATCTCAAATCAGAAAATGTGCTTTTAGGGGAAGACATGTGTGTAAAAGTAGCAGACTTTGGAATCTCATGCTTAGAATCCCAGACTGGTAGCGCGAAAGGATTCACGGGAACTTACCGTTGGATGGCGCCGGAAATGATCAAAGAAAAGCAGCATACCAAGAAAGTAGATGTCTATAGTTTCGCCATAGTTCTATGGGAGCTTTTAACAAGACTGACACCATTTGAAAACATGACACCAGAGCAGGCAGCTTATGCAGTGACCCACAAGAATGCAAGGCCTCAGTTACCAAGTGAGTGTCCACGGGCATTTAGTGATCTCATCAGTAGATGCTGGTCAAACAACCCAGATAAACGCCCACATTTTGATGAGATAGTCTCCATCTTGGAGACATATACCGAATCGCTTGAGAAGGATCCAGAATTTTTCACTACTTACAAACCACGTTCAAGTAATGTATTTCTGAAATGCTTGCCTAAATGTAACGCTCGCCATATAACTGCATCTTGCAAAGCTTAG 1068 0.4448 MKKNFYWFKEISNNVRSGRRLSLGEYKRAVSWSKYIVSSGAAIKGDGEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHIDVAIKLVSQPEEDEDLAVLLEKQFTSEVALLFRLRHPNIITFVGACKKPPVFCIITEYLAGGSLRKYLHQQGPHSLPLELVLKLALDIARGMQYLHSQGILHRDLKSENVLLGEDMCVKVADFGISCLESQTGSAKGFTGTYRWMAPEMIKEKQHTKKVDVYSFAIVLWELLTRLTPFENMTPEQAAYAVTHKNARPQLPSECPRAFSDLISRCWSNNPDKRPHFDEIVSILETYTESLEKDPEFFTTYKPRSSNVFLKCLPKCNARHITASCKA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1624 355 Pfam Protein tyrosine and serine/threonine kinase 60 312 IPR001245 GO:0004672|GO:0006468
Dod05g1624 355 ProSiteProfiles Protein kinase domain profile. 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1624 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Dod05g1624 355 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Dod05g1624 355 PRINTS Tyrosine kinase catalytic domain signature 220 230 IPR001245 GO:0004672|GO:0006468
Dod05g1624 355 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Dod05g1624 355 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Dod05g1624 355 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Dod05g1624 355 PANTHER SERINE-THREONINE PROTEIN KINASE 3 334 - -
Dod05g1624 355 Gene3D Phosphorylase Kinase; domain 1 48 139 - -
Dod05g1624 355 Gene3D Transferase(Phosphotransferase) domain 1 141 336 - -
Dod05g1624 355 SMART serkin_6 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1624 355 SUPERFAMILY Protein kinase-like (PK-like) 48 312 IPR011009 -
Dod05g1624 355 CDD STKc_MAP3K-like 65 312 - -
Dod05g1624 355 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 3 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1624 Dod-Chr5 41344914 41349590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1624 31 321 MAP Kinase Kinase Kinase AT1G62400 63.051 7.34e-134 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod05g1624 PK_Tyr_Ser-Thr 1.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1624 - - gmx:100785212 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1624 05 41344914 41349590 Dod05g1624 05 41344914 41349590 ECH
Dod05g1624 05 41344914 41349590 Dod09g0291 09 4461287 4466400 PCT