Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1607 ATGGGAAGAAAAAAGACAGAGGATGCAGCCCCCTCTGCTAAGACTAAGGCAAGTGGCAAAGATGCTTCTAAGAAGGAAAAGATTTCAGTCTCTGCTATGCTAGCCAGTATGGATGCAAAGCCTGATAAACCCAAAAAGGTCTCTTCATCCAGTAAGCCCAAGGCAAAATCTGCTCCAAAAGCTTCTGCATACACTGATGGTATTGATCTTCCTCCCTCTGATGATGAAGAAGATGAAGATATCTTGGAAGAAGAGCAAGAGCAGAATAATGCGTCCAGACGATCCAGTCAGCAACAGAAGCCTGACTTGAAGCCACTTGATGCATTGACCACAGACAAAGAGTTGAAAAAGCGTGAAAAGAAGGATTTTTTAGCAGCTCAAGCTGCTGAGCAGGCAAAGAAGGAAGCTCTTAAGGATGATCATGATGCTTTCACTGTGGTCATTGGAAGCCGAACTTCAGTGCTTGATGGAGAAGATGATGCTGATGCTAATGTCAAAGATATAACAATAGAAAATTTCTCGGTGTCTGCTCGGGGTAAAGAACTTCTGAAGAATGCATCAGTGAGGATATCCCATGGGAAGAGGTATGGTTTGGTTGGGCCCAATGGAAAGGGCAAGTCCACCCTATTGAAGCTTCTTGCTTGGAGGAAGATACCAGTCCCTAAGAATATTGATGTCCTTCTGGTTGAACAGGAGGTAGTTGCTGATGATAAAACAGCGCTTGAGGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAAATTCGACAAGAAGTTGCTTCTCTACAAAATGCAACTTCTGTTGAAGATAGTGTGGACAAAGACAATAGTAATGAGGAAGACGATGCAGGAGAGAAGCTAGCAGAGCTGTATGAAAAACTACAGCTGATGGGGTCTGATGCTGCTGAAGCTCAGGCATCAAAGATTTTAGCTGGTCTCGGTTTTACAAAGGATATGCAAGGCCGGCCTACAAAATCCTTTAGTGGTGGATGGAGGATGAGGATTTCTCTAGCTCGAGCACTTTTTGTGCAGCCAACTCTATTATTGCTTGATGAACCTACAAATCATCTTGACTTGAGGGCCGTTCTCTGGTTGGAAGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTCGTTGTCTCACATGATAGGGATTTCCTCAATACAGTTTGCACTGAGATTATTCATCTGCATGATTTGAAACTCCATTTCTATCGTGGAAATTTTGATGATTTTGAGAGCGGGTATGAACAGCGTCGTAAAGAGATGAATAAGAAGTATGAGATTTACGACAAGCAATTGAAAGCTGCTAAAAGAAGTGGAAACCGGGTTCAGCAAGAAAAGGTGAAGGATCGAGCAAAGTTTGCAGCAGCCAAGGAAGCATCTAAAAGCAAGGGCAAGGGCAAGGGCAAGGTGGTTGATGAAGACGAGGCCCTACCAGAGGTTCCACAAAAATGGAGGGACTACAGCGTTGAGTTTCACTTTCCTGAACCTACCGAGCTGACACCTCCACTTCTGCAGCTTATTGAAGTGAGCTTTAGCTACCCAAACCGGGAGGATTTCAGACTCTCAGATGTTGATGTTGGCATTGATATGGGAACCCGTGTTGCCATTGTTGGGCCTAATGGAGCTGGAAAGTCTACACTGCTGAACCTTCTTGCTGGCGATTTGATGCCAACAGAGGGTGAAGTTCGAAGGAGTCAGAAGTTGAGGATAGGAAGATATTCGCAACACTTTGTGGACCTTCTAATAATGGATGAAACACCTGTTCAGTATCTTCTTCGTCTCCACCCAGACCAGGAGGGACTCAGCAAGCAGGAGGCTGTGCGTGCAAAACTCGGTAAGTTTGGGCTACCTAGTCATAACCATCTTACCCCTATTGCCAAGCTATCAGGAGGGCAGAAAGCTAGGGTGGTCTTCACCTCGATATCCATGTCAAAACCCCACATTTTATTGTTAGATGAGCCCACTAATCATCTTGACATGCAAAGCATTGATGCATTGGCCGATGCACTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGACTCGAGATTGATATCTCGTGTTTGTGATGATGAAGAGAGGAGTCAAATCTGGGTTGTTGAAGATGGAACTGTCAGGACTTTCCCTGGAACATTTGATGATTACAAGGAGGAGTTGCTGAGAGAAATTAAAGCGGAAGTTGATGATTGA 2196 0.4444 MGRKKTEDAAPSAKTKASGKDASKKEKISVSAMLASMDAKPDKPKKVSSSSKPKAKSAPKASAYTDGIDLPPSDDEEDEDILEEEQEQNNASRRSSQQQKPDLKPLDALTTDKELKKREKKDFLAAQAAEQAKKEALKDDHDAFTVVIGSRTSVLDGEDDADANVKDITIENFSVSARGKELLKNASVRISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVADDKTALEAVVSANEELVKIRQEVASLQNATSVEDSVDKDNSNEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKYEIYDKQLKAAKRSGNRVQQEKVKDRAKFAAAKEASKSKGKGKGKVVDEDEALPEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLMPTEGEVRRSQKLRIGRYSQHFVDLLIMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVRTFPGTFDDYKEELLREIKAEVDD* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1607 731 PANTHER - 5 731 - -
Dod05g1607 731 Gene3D - 470 730 IPR027417 -
Dod05g1607 731 MobiDBLite consensus disorder prediction 70 85 - -
Dod05g1607 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 168 429 IPR003439 GO:0005524
Dod05g1607 731 ProSitePatterns ABC transporters family signature. 326 340 IPR017871 GO:0005524
Dod05g1607 731 Pfam ABC transporter 183 354 IPR003439 GO:0005524
Dod05g1607 731 Gene3D - 165 451 IPR027417 -
Dod05g1607 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 717 IPR027417 -
Dod05g1607 731 SMART AAA_5 530 706 IPR003593 -
Dod05g1607 731 SMART AAA_5 192 398 IPR003593 -
Dod05g1607 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 504 729 IPR003439 GO:0005524
Dod05g1607 731 Coils Coil 418 438 - -
Dod05g1607 731 Coils Coil 722 731 - -
Dod05g1607 731 MobiDBLite consensus disorder prediction 1 114 - -
Dod05g1607 731 Coils Coil 244 264 - -
Dod05g1607 731 CDD ABCF_EF-3 504 706 - -
Dod05g1607 731 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 5 731 - -
Dod05g1607 731 Pfam ABC transporter 521 656 IPR003439 GO:0005524
Dod05g1607 731 CDD ABCF_EF-3 168 399 - -
Dod05g1607 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 406 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1607 Dod-Chr5 41173950 41176272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1607 503 716 Calmodulin-binding Proteins AT2G36910 28.333 1.43e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1607 K06184 - gmx:100806865 1181.01