Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1605 ATGCAGAGCGCAGCTTTCAGTCTGTCTGTCTCCCCCAATGGCCTCTCTTCCCACAAACACAAACACAAACCCCGCGCACGATTCAACGCTGTCCCTCTCTCTGCTTCTTCCAATTCCAAACCCGACAACCTCATCAACGTGGCTTCCTCCTCTTCATTCCCACGCCAACCAACACCGTGGCCTCTCTCTTCTTCATCCTCTTTCAAACTCAGGCCTAATTGGTGGACACCCTCCGATCGCTTCGACGCCAAGGCCACCTCGGAGAGTGCCCGCGACAGCAGCAGCAGCAACGTTTTGTTGAAAACTCTGGAGCTCGGAGCCTTGTTTGCCCTCTGGATCATCTTTAACATATACTTCAACATCTACAACAAACAGGTGTTGGAGGTGTACCATTTTCCGTTCACCGTCACTGCGGTTCAATTTGCTGTTGGGGCTGCCCTTGTGTCCTTTATGTGGGGTTTTAATCTCTATAAGAGGCCAAAAATCAGTGCTGCCCAGCTTGCAGCAATATTGCCACTGGCTTTGGTACATACTTTCGGGAATCTTTTCACTAACATGAGTCTTGGAAAGGTTGCTGTGTCTTTCACTCATACAATAAAGGCAATGGAGCCTTTCTTTTCAGTGATCCTTTCTGCTATGTTCCTTGGAGAGATACCTAACGTATGGGTGGTAGGTTCCCTGGTGCCTATTGTTGGTGGGGTGGTACTGGCCTCAGCTACAGAGGTCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATCTGTCAAACCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAAGAAGGAGGAATCTATGGACAACATTACCCTCTTCTCAATAATAACAGTTATGTCCTTCTTATTGACTGCACCTGTGACTGTCATAATGGAGGGTGTCATATTTACCCCTGCTTACCTGCAATCCGCTGGATTGAATGTTAGACAAGTGTACATCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAGCAAGTTGCATATATGATCCTGCAGAGGGTGTCACCTGTTACCCATTCAGTGGGAAACTGTGTGAAGCGGGTTGTGGTGATAGTGAGCTCTGTCTTGTTCTTCCGAACACCAGTCTCACCTGTTAACGCATTTGGGACTGCTATAGCTCTAGCCGGAGTTTTCCTCTACTCCAGGGTGGAGCGAAGGAAGCCGAAGAAGACAACCTAG 1215 0.479 MQSAAFSLSVSPNGLSSHKHKHKPRARFNAVPLSASSNSKPDNLINVASSSSFPRQPTPWPLSSSSSFKLRPNWWTPSDRFDAKATSESARDSSSSNVLLKTLELGALFALWIIFNIYFNIYNKQVLEVYHFPFTVTAVQFAVGAALVSFMWGFNLYKRPKISAAQLAAILPLALVHTFGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEIPNVWVVGSLVPIVGGVVLASATEVSFNWAGFWSAMASNLSNQSRNVLSKKLMVKKEESMDNITLFSIITVMSFLLTAPVTVIMEGVIFTPAYLQSAGLNVRQVYIRSLLAALCFHAYQQVAYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFRTPVSPVNAFGTAIALAGVFLYSRVERRKPKKTT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1605 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 238 - -
Dod05g1605 404 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 103 402 IPR004696 GO:0016021|GO:0022857|GO:0055085
Dod05g1605 404 MobiDBLite consensus disorder prediction 1 25 - -
Dod05g1605 404 PANTHER SOLUTE CARRIER FAMILY 35 8 378 - -
Dod05g1605 404 MobiDBLite consensus disorder prediction 1 15 - -
Dod05g1605 404 Pfam Triose-phosphate Transporter family 104 393 IPR004853 -
Dod05g1605 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 304 398 - -
Dod05g1605 404 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 8 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1605 Dod-Chr5 41157473 41161301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1605 1 404 Antiporters AT5G33320 66.033 2.92e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1605 K15283 - gmx:100780925 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1605 05 41157473 41161301 Dod09g0268 09 3971577 3975503 PCT