Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1597 ATGTTATTGTACGAGGATGCAGCAACTGTTTTGACATGGGGGCAACGGTTTCAAATCATATGTGGAATACCTGAGGGCCTAGCATACTTTCATGGAGGCTCTGGATCAAAGATTATTCACAGAGACATTAAGTCCAGCAACATTCTGCTTGATGAGAATCTTAATCCAAAAATTGCTGATTTTGGTCTTGCACGTTATGTTACTGAAAATAGATCTCATGTCTGGAAGAATTACAAGGCAAAGAACATCACAGCATCCGTGGATCCTGCATTGCTCGGCAAATTTGTGCCACAAGAGGCATCAAGTGCTCTCCGAGCTGGCCTACTTTGTACACAATCATCTGTTACACATAGACCATCCATGTCTGAAGTGGTTCAGATTCTAACTGTTATTCCCTCCCCAAAGCAACAGCCATTCCTCAATTCCACTGTGCTAACCCCAGATGACCGCACACAAACTTCCACCATTGGTAGCATTGTGCCTTCAAATGGGCACACAAGTGCAAGATCCTCTTTCCACAGCACCACAAGTTCCCTGATCTCAAGTGAGGATTCACTAGCAAATTCCTTTTCTTCTTCTTCCCCACACTTCATAGGGAGCCCTGATTCAAAAATACAAGTAAATATTGGTCCACCTGATCCAAGGTGA 648 0.4367 MLLYEDAATVLTWGQRFQIICGIPEGLAYFHGGSGSKIIHRDIKSSNILLDENLNPKIADFGLARYVTENRSHVWKNYKAKNITASVDPALLGKFVPQEASSALRAGLLCTQSSVTHRPSMSEVVQILTVIPSPKQQPFLNSTVLTPDDRTQTSTIGSIVPSNGHTSARSSFHSTTSSLISSEDSLANSFSSSSPHFIGSPDSKIQVNIGPPDPR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1597 215 SUPERFAMILY Protein kinase-like (PK-like) 8 138 IPR011009 -
Dod05g1597 215 MobiDBLite consensus disorder prediction 145 201 - -
Dod05g1597 215 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 4 74 - -
Dod05g1597 215 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 74 - -
Dod05g1597 215 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 73 209 - -
Dod05g1597 215 Gene3D Transferase(Phosphotransferase) domain 1 74 146 - -
Dod05g1597 215 Gene3D Transferase(Phosphotransferase) domain 1 2 73 - -
Dod05g1597 215 MobiDBLite consensus disorder prediction 145 215 - -
Dod05g1597 215 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 73 209 - -
Dod05g1597 215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 38 50 IPR008271 GO:0004672|GO:0006468
Dod05g1597 215 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1597 215 Pfam Protein kinase domain 18 72 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1597 Dod-Chr5 41094974 41097149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1597 1 74 Receptor kinase-like Gene Family AT5G40380 59.459 6.52e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod05g1597 Pkinase 1.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1597 - - gmx:100780384 174.481