Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1587 ATGCCTGTAAATCCATGGACCCTCTTCTTCTTATGCATTTGCCTTTTCTTCAACCCATACCAACATCCCTTCTTGGCTCTCGCAGTGAACCAACAAGGGGAATCTCTCCTCTCATGGAAGAGAACTCTGAACGGTTCTTCCTTAGAGGTGTTGAGTAATTGGGACCCATTTGAAGACACACCATGTAGCTGGTTTGGAGTGAGCTGCAACTTGAACAACGAAGTAGTACAATTGGATCTGAGGTATGTTGATTTGATGGGAAAACTCCCTTCCAATTTCACTTCATTGTTGTCCTTAAGCAAACTCATCTTAACCGGAGCAAACCTCACCGGTTCAATCCCAAAAGAGATTGGTTCACTCAAAGAACTCAGCTACTTGGACCTTAGTGACAATGCATTGGGTGGCGAAATCCCAAGTGAGCTCTGCTACTTGCCAAAGCTCGAGGAGCTTCACCTGAACTCAAACGAGCTCGTGGGGTCAATTCCAGTTGCAATTGGCAACCTCACAAGGCTTCAGAAGCTGACCCTTTATGATAACCAGTTGAGTGGCGAGATCCCAAGCACAATCGGAAACATGAAGAGCCTCGAAGTGATCAGAGCCGGAGGGAACAAGAATCTCCAAGGTCCATTACCTCAGGAGATTGGAAACTGTTCAAATTTGGTCATGCTGGGGCTTGCGGAAACAAGCATCTCGGGTTCTCTACCACCAACGCTAGGCCTATTGAAGCAGCTTGACACCATTGCAATCTACACTTCACTCCTCACAGGCCAAATCCCAGAAGAACTCGGTGACTGCACTATGCTCCAGAACATCTATCTCTATGAAAGCTCCCTCACGGGATCCATACCGACCAAATTGGGAAACCTTAAAAACCTCAAAAACCTGTTGCTCTGGCAGAACAACCTCGTTGGGACCATCCCACCGGAGATTGGTAACTGCTTTCAGTTACAAGTCATTGACGCGTCAATGAACTCCATAACTGGAAGCATACCGAAGAGCTTCGGGAACCTGACGTCCCTGGAGGAGCTTCAGCTCAGTGTCAACCAGATTTCCGGTGAGATTCCCGCAGAGCTTGGGAACTGTCAGCAACTGACGCACGTGGAGCTGGACAACAACCTCATCACGGGGACCATACCTTCCGAATTTGGGAACCTTGTGAACCTGACGCTGTTGTTCCTTTGGCACAACAAGCTCGAAGGGAACATACCCTCGTCGCTCGGCAATTGCAAGAATTTGGAGGCCGTTGATCTCTCGCAGAACATGTTGACAGGTCAGATACCAAAGGGGATATTCCAGCTCAGCAATCTCAACAAACTTCTGTTACTCTCTAACAACCTCTCCGGGAGCATTCCCTCTGAGCTTGGTAACTGTTCGTCGCTGATTCGGTTCCGAGCAAGTAACAACGAAATCACTGGGAGCATTCCCCCTGAGATTGGGAACCTGAAGAATCTGAACTTCTTGGACCTCGCTGCAAACCGAATTGCAGGGGTTATCCCGGAGGAGATATCCGGGAGCCGGAATCTCACTTTCTTGGACTTGCATTCTAATTTGATCGCCGGAGCTCTGCCGGAAAGTCTCAGCCAGCTTGTTTCGCTTCAATTTCTGGATGTTTCTGATAACTTGATTGAAGGTAATCTGAGCCCCAAATTGGGATCACTTGGCGCGCTTACGAAACTTGTTCTCGGGAAGAATCGGATCTCTGGTTCGATTCCGAGTCAACTCGGTTCCTGCTCGAAGCTGCAGCTGCTGGACCTTGGAAGCAACGCGCTCGCCGGAAAAATCCCCGGCAGCCTCGGCAACATACCGGCGTTGGAGATAGCATTGAATCTGAGCCTGAACCAACTCTCCGGCGAGATCCCTAGGGAGTTTTCCGGCCTGGCGAAGCTCGGAGTGTTGGACATTTCGCACAACGCTCTCACCGGAGACCTTCAATATCTCGCCGACCTGCAAAATCTCGTGGTGCTGAACGTCTCGTACAACAAATTCTCCGGGCGACTTCCGGACACACCGTTCTTCGCGAAGCTTCCACTGAGCGTGCTCGCCGGGAACCCCGCACTGTGCTTCGCCGGTGACAGCCAGTGCGACGGTGGCGACAGCGGTCCGAAGTCCGGGCGGCGGGCTAGGGAGGCTCGCGTGGCGATGGTTGTCCTGTTGTGCACGGCGTGCGCGCTCCTCATGGCGGCGCTTTACGTCGTCATCTCGGCAAAACGACGAGGGGACCGCGAAAACGACGTCGAAATAGACGGAAAGGACAGTGATGTGGCAGACATGTCCCCACCGTGGGAGGTAACACTTTACCAGAAACTCGACCTGTCGATCGCTGACGTGGCAAAATGCCTCTCCGCCAATAACGTCATCGGGCACGGCCGCTCCGGCGTCGTTTACAAGGTGAACTTGCCGGCGACGGGGCTAACGATCGCCGTCAAGAAGTTCAAGTCGTCGGAGAAATTCTCCGCGGCGGCGTTCTCATCGGAGATTGCCACGCTGGCAAGGATCCGGCACCGTAACATCGTGCGGTTACTGGGCTGGGGTGCGAACCGGAGGACGAAGTTACTGTTTTACGATTATTTACCGAACGGTAACTTGGACACGCTGTTGCACGAGGGGTGCACAGGATTAATCGAGTGGGAGACGCGGCTCAAGATAGCATTGGGCGTTGCTGAGGGCGTTGCTTACTTGCACCATGATTGCGTCCCTGCTATCTTGCACCGGGACGTTAAGGCGCAGAACATCTTGTTAGGTGACAGGTACGAACCGTGTTTGGCTGATTTTGGATTCGCTCGATTCGTGGAAGAGGATCATGCTTCGTTCTCTGTTAATCCACAGTTCGCAGGTTCTTACGGCTACATTGCTCCTGAGTATGCTTGCATGCTTAAGATCACAGAGAAGAGCGATGTGTACAGCTTTGGGGTGGTCCTACTTGAGATATTAACGGGGAAAAGGCCTGTAGATCCATCATTCCCGGATGGGCAACACGTTATTCAATGGGTCAGAGAGCACTTAAAGAGCAAGAAGGACACAATTGAGGTCCTGGATCCCAAGCTTCAAGGCCATCCAGACACACAAATACAAGAGATGCTACAGGCACTTGGTATCTCTCTACTGTGCACAAGCAGTCGTGCGGACGATCGACCGACAATGAAAGATGTGGCGGCATTATTGAGGGAAATCAGACACGATCCTCCAGGCGGGTCTGAGCCCCACAAGCCCAAAACAACCCAGGCTTCGTCGTATTCCTCGTCCTCGGTCACCTCTGCTCAGTTATTGCTCCTCCAATCCACCTCTCATTCCTCATCAGCATCAATTGCCTATTCCTCTTCCTCAGCTGCTGGATACCACCCACCAAGAAATCAATCATGA 3360 0.5173 MPVNPWTLFFLCICLFFNPYQHPFLALAVNQQGESLLSWKRTLNGSSLEVLSNWDPFEDTPCSWFGVSCNLNNEVVQLDLRYVDLMGKLPSNFTSLLSLSKLILTGANLTGSIPKEIGSLKELSYLDLSDNALGGEIPSELCYLPKLEELHLNSNELVGSIPVAIGNLTRLQKLTLYDNQLSGEIPSTIGNMKSLEVIRAGGNKNLQGPLPQEIGNCSNLVMLGLAETSISGSLPPTLGLLKQLDTIAIYTSLLTGQIPEELGDCTMLQNIYLYESSLTGSIPTKLGNLKNLKNLLLWQNNLVGTIPPEIGNCFQLQVIDASMNSITGSIPKSFGNLTSLEELQLSVNQISGEIPAELGNCQQLTHVELDNNLITGTIPSEFGNLVNLTLLFLWHNKLEGNIPSSLGNCKNLEAVDLSQNMLTGQIPKGIFQLSNLNKLLLLSNNLSGSIPSELGNCSSLIRFRASNNEITGSIPPEIGNLKNLNFLDLAANRIAGVIPEEISGSRNLTFLDLHSNLIAGALPESLSQLVSLQFLDVSDNLIEGNLSPKLGSLGALTKLVLGKNRISGSIPSQLGSCSKLQLLDLGSNALAGKIPGSLGNIPALEIALNLSLNQLSGEIPREFSGLAKLGVLDISHNALTGDLQYLADLQNLVVLNVSYNKFSGRLPDTPFFAKLPLSVLAGNPALCFAGDSQCDGGDSGPKSGRRAREARVAMVVLLCTACALLMAALYVVISAKRRGDRENDVEIDGKDSDVADMSPPWEVTLYQKLDLSIADVAKCLSANNVIGHGRSGVVYKVNLPATGLTIAVKKFKSSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLDTLLHEGCTGLIEWETRLKIALGVAEGVAYLHHDCVPAILHRDVKAQNILLGDRYEPCLADFGFARFVEEDHASFSVNPQFAGSYGYIAPEYACMLKITEKSDVYSFGVVLLEILTGKRPVDPSFPDGQHVIQWVREHLKSKKDTIEVLDPKLQGHPDTQIQEMLQALGISLLCTSSRADDRPTMKDVAALLREIRHDPPGGSEPHKPKTTQASSYSSSSVTSAQLLLLQSTSHSSSASIAYSSSSAAGYHPPRNQS* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1587 1119 Gene3D Phosphorylase Kinase; domain 1 759 856 - -
Dod05g1587 1119 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Dod05g1587 1119 Pfam Leucine rich repeat 363 422 IPR001611 GO:0005515
Dod05g1587 1119 Pfam Protein kinase domain 783 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1587 1119 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1075 - -
Dod05g1587 1119 Gene3D Ribonuclease Inhibitor 142 223 IPR032675 -
Dod05g1587 1119 SMART serkin_6 780 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1587 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672|GO:0006468
Dod05g1587 1119 SUPERFAMILY L domain-like 31 303 - -
Dod05g1587 1119 ProSiteProfiles Protein kinase domain profile. 780 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1587 1119 SMART LRR_sd22_2 505 528 - -
Dod05g1587 1119 SMART LRR_sd22_2 385 417 - -
Dod05g1587 1119 SMART LRR_sd22_2 626 651 - -
Dod05g1587 1119 SMART LRR_sd22_2 481 504 - -
Dod05g1587 1119 SMART LRR_sd22_2 120 152 - -
Dod05g1587 1119 SMART LRR_sd22_2 529 548 - -
Dod05g1587 1119 Gene3D Ribonuclease Inhibitor 31 141 IPR032675 -
Dod05g1587 1119 ProSitePatterns Protein kinases ATP-binding region signature. 786 810 IPR017441 GO:0005524
Dod05g1587 1119 Gene3D Ribonuclease Inhibitor 329 428 IPR032675 -
Dod05g1587 1119 MobiDBLite consensus disorder prediction 1058 1080 - -
Dod05g1587 1119 Gene3D Ribonuclease Inhibitor 429 699 IPR032675 -
Dod05g1587 1119 Gene3D Ribonuclease Inhibitor 224 328 IPR032675 -
Dod05g1587 1119 Gene3D Transferase(Phosphotransferase) domain 1 857 1071 - -
Dod05g1587 1119 SUPERFAMILY RNI-like 270 640 - -
Dod05g1587 1119 SMART LRR_typ_2 506 529 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 385 409 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 649 673 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 144 167 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 120 142 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 481 505 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 553 577 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 433 457 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 168 192 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 289 313 IPR003591 -
Dod05g1587 1119 SMART LRR_typ_2 337 361 IPR003591 -
Dod05g1587 1119 SUPERFAMILY Protein kinase-like (PK-like) 772 1056 IPR011009 -
Dod05g1587 1119 PANTHER OS01G0170300 PROTEIN 4 1075 - -
Dod05g1587 1119 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1587 Dod-Chr5 40971232 40975904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1587 27 1109 Receptor kinase-like Gene Family AT5G56040 53.516 0.0 1114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod05g1587 Pkinase 2.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1587 - - adu:107493731 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1587 05 40971232 40975904 Dod05g1587 05 40971232 40975904 ECH