Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1568 ATGGAAGAAGAACCCAAGCACAGACACCACACTAACTCCATCAAGTTCCTTTGCAGCTACGGCGGCAAGATCCTCCCTCGCCCCGTCGACGGCAAGCTCCGCTACGCCGGCGGCCACACCAGAGTCCTCGCCGTCCATCCTTCCATCTCTTTCTCAGAGTTGATGGTGAAGCTCGGCGAGTTGTGCGGTTCTTCGGTAAACCTGAGGTGTTCGTTGCCGAACGGAGACTTGGAAACTTTGATTTCCATAAAAAACGACGAAGATTTAGCGAACATAATCGAGGAATACGACAGAGCTTCGTCGTCGTTGGCTCATCCATTGAAGATCAGAGCCATTCTTTCGCCGCCGAAGTGTCTCAAGAAACTGTCTCCTCCTCCGTCATCGTGGCCAAGCGCCGCTCACTCTCCGTCCGGATCGCCTCACTCCCCCGCCGAATCGCCGCCGTATGAGGCGGCTCAGCGGTTCCTCCGCCAGAATTGCTCGCCGGTCGGGCTTCCGGTTGGTTTACGTAACGGATGTTGCTGGTGCGCGGGGCAATTCGACGGGAGCCCTAGATTCCGTTATCGCGGGTCTCACTCCAATTTCTACTGCCACTGA 597 0.5645 MEEEPKHRHHTNSIKFLCSYGGKILPRPVDGKLRYAGGHTRVLAVHPSISFSELMVKLGELCGSSVNLRCSLPNGDLETLISIKNDEDLANIIEEYDRASSSLAHPLKIRAILSPPKCLKKLSPPPSSWPSAAHSPSGSPHSPAESPPYEAAQRFLRQNCSPVGLPVGLRNGCCWCAGQFDGSPRFRYRGSHSNFYCH* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1568 198 PANTHER OS05G0427100 PROTEIN-RELATED 11 198 - -
Dod05g1568 198 MobiDBLite consensus disorder prediction 123 148 - -
Dod05g1568 198 SMART PB1_new 28 116 IPR000270 GO:0005515
Dod05g1568 198 SUPERFAMILY CAD & PB1 domains 30 119 - -
Dod05g1568 198 Gene3D - 32 112 - -
Dod05g1568 198 CDD PB1_UP2 17 113 - -
Dod05g1568 198 PANTHER PB1 DOMAIN PROTEIN 11 198 - -
Dod05g1568 198 Pfam PB1 domain 28 100 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1568 Dod-Chr5 40653280 40654912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1568 14 101 MAP Kinase Kinase Kinase AT5G57610 50.000 1.62e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1568 - - gmx:100810563 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1568 05 40653280 40654912 Dod09g0237 09 3493158 3496520 PCT