Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1548 ATGCAAATGGGAATGGAATGCTTTTACAAAAGTGAAAAAATCAAATTATCCTTAATTCTAAACCATCATATCACTTGTTGGAGCATTGTCACCATCACCAGACCACCACTGTTAGCAGCCGGACCACTAATGCTAGCCGCCCAATTGTCATCTCTGACAGTCAGACCAATGTTGTTGATCAGTGTCATTGTTCATCAGACCATTGCCGTTGAGACCTTTGTAGCTGGAACCGACGCTGCATCAGCCACAGTGATATGGGCACTGTCTAAGCTGATTAGGAACCCAGAGGCAATGAAAAGAGCACAAGAAGAGGAGGCACTAAGAATCCATCCACCAGCACCATTGCTTGTGCCAAGAGAGACTACCAAGACTTGCATGATCAAAGGGTATGAAATTCCAGCCAAAACGAGGATGTTTATCAATGCAAAATCGATAGCAATGGACCCAACTTGTTGGGAGATCCCAAATGAGTTCTTGCCAGAGAGATTCCTTGATAGTCCAATCGATTTTAGAGGACAAAATCACTTTGAGATGTTGCCATTTGGAGCTGGCCGGAGGGTTTGCCCCGGAGTGAACTTTGCAATGCCAATAATTGAGCTTGTGTTAGCAAATCTTCTGTTTCGTTTTGATTGGGAACTTCCACATGAACTTAAAGAGAAGACCTTGATATGGAAGAAGCATTTGGCATTACAGTGCACAAGAAAGCTCCTCTTTGGCTGA 720 0.4375 MQMGMECFYKSEKIKLSLILNHHITCWSIVTITRPPLLAAGPLMLAAQLSSLTVRPMLLISVIVHQTIAVETFVAGTDAASATVIWALSKLIRNPEAMKRAQEEEALRIHPPAPLLVPRETTKTCMIKGYEIPAKTRMFINAKSIAMDPTCWEIPNEFLPERFLDSPIDFRGQNHFEMLPFGAGRRVCPGVNFAMPIIELVLANLLFRFDWELPHELKEKTLIWKKHLALQCTRKLLFG* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1548 239 PANTHER CYTOCHROME P450 71A9 68 104 - -
Dod05g1548 239 PANTHER CYTOCHROME P450 71A9 105 233 - -
Dod05g1548 239 PRINTS E-class P450 group I signature 178 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PRINTS E-class P450 group I signature 141 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PRINTS E-class P450 group I signature 84 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PRINTS E-class P450 group I signature 64 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PRINTS E-class P450 group I signature 188 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PRINTS P450 superfamily signature 75 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PRINTS P450 superfamily signature 188 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PRINTS P450 superfamily signature 179 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PRINTS P450 superfamily signature 101 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 181 190 IPR017972 GO:0005506|GO:0016705
Dod05g1548 239 Gene3D Cytochrome P450 46 237 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 PANTHER OS08G0105600 PROTEIN 68 104 - -
Dod05g1548 239 PANTHER OS08G0105600 PROTEIN 105 233 - -
Dod05g1548 239 SUPERFAMILY Cytochrome P450 66 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 Pfam Cytochrome P450 104 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g1548 239 Pfam Cytochrome P450 69 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1548 Dod-Chr5 40411841 40412966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1548 71 237 Cytochrome P450 AT1G13090 45.128 6.71e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1548 K20617 - gmx:100806157 236.498