Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1538 ATGGGTCTCCAGACCATAGTCATCGACAACATGCAGAGCACCCGGATCTTACCCGAACCCAATGTCTTCATACGCACTTCCGATGGAACACGGATTCCGGCCCACGCTAGCATTCTGGCTTCGGTGTCGCCGGTTTTGGAGAACATCATAGACCGACCACGCAAACATCGGAGCTCCGAAAGAATCATCCAGATTCACGGCGTTCCGTGTGACGCCGTCACGGCCTTCGTCGATTTCATCTACACCTTGAGGAGCACGGAGGAGCAGATGGACAAGTACGGGATGCACCTGCTGGCGCTGTCGCACGTGTACATGGTGCCGCAGCTGAAGCAGAGGTGCACCAAGGGGCTCGCGCAGCGCGTGACCACCGAAAACGTCATCGACCTGCTTCAACTGGCGCGCCTCTGCGACGCACCGGATCTCCACCTCAAGTGCATGAGGCACCTCACCGATCATTTCAAAGCCGTCGAGAAAACAGAGGGTTGGAAGTTCCTCAACAAGCACGATCCCTGGCTAGAACTCGACATCCTTCGCTTCATCGACGAACACGAAACGAGGAAAGAGAAATCGAGGAGGCACAGGGAGGAACAGAGGGTGTATGCAGAGCTAAGCGAGGCGATGGAGTGTTTGGAACACATATGCACGGAAGGGTGCACCGACGTTGGACCGTACGACGTGGAAGCGAAGAGAGAGAGGAGGCCGTGCGGCAGGTTCGCCACGTGTCAGGGACTTCAGCAACTGATCCGCCACTTCGCCACGTGTCACAGGAGGATGAATAACCGAGCGTGCTTGCGTTGCAAGCGAATGTGGCAGCTATTCAGGCTTCATGCCTACATTTGTCAACAAACTGATTCCTGCAAGGTTCCTCTCTGCAGGCAAATTCAGTTGAAAATGCAGCGAGAGAAGATGAAAGATGATCCAAGGTGGAAACAACTAGCGAGGAAGGTGGCCTCAGCCAGAGTCATGCATTCCTTGGCTCTGCCAAAGAGGAAGCGGGATGAGGAAATTAGAGTGACTATAGACAATCCTGAGATCAGAACTTTTGAACTGCAGTGA 1056 0.5426 MGLQTIVIDNMQSTRILPEPNVFIRTSDGTRIPAHASILASVSPVLENIIDRPRKHRSSERIIQIHGVPCDAVTAFVDFIYTLRSTEEQMDKYGMHLLALSHVYMVPQLKQRCTKGLAQRVTTENVIDLLQLARLCDAPDLHLKCMRHLTDHFKAVEKTEGWKFLNKHDPWLELDILRFIDEHETRKEKSRRHREEQRVYAELSEAMECLEHICTEGCTDVGPYDVEAKRERRPCGRFATCQGLQQLIRHFATCHRRMNNRACLRCKRMWQLFRLHAYICQQTDSCKVPLCRQIQLKMQREKMKDDPRWKQLARKVASARVMHSLALPKRKRDEEIRVTIDNPEIRTFELQ* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1538 351 Pfam TAZ zinc finger 204 291 IPR000197 -
Dod05g1538 351 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 3 349 - -
Dod05g1538 351 Gene3D Potassium Channel Kv1.1; Chain A 11 121 IPR011333 -
Dod05g1538 351 CDD BACK 122 169 - -
Dod05g1538 351 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 3 349 IPR044513 -
Dod05g1538 351 ProSiteProfiles BTB domain profile. 20 89 IPR000210 GO:0005515
Dod05g1538 351 Gene3D TAZ domain 193 327 IPR035898 -
Dod05g1538 351 SUPERFAMILY TAZ domain 195 295 IPR035898 -
Dod05g1538 351 Gene3D - 122 192 - -
Dod05g1538 351 Pfam BTB/POZ domain 21 119 IPR000210 GO:0005515
Dod05g1538 351 SMART BTB_4 20 121 IPR000210 GO:0005515
Dod05g1538 351 SUPERFAMILY POZ domain 26 151 IPR011333 -
Dod05g1538 351 SMART TAZ_2 197 292 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1538 Dod-Chr5 40318924 40323176 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Dod05g1538 BTB 7e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1538 - - cam:101496955 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1538 05 40318924 40323176 Dod05g1538 05 40318924 40323176 ECH
Dod05g1538 05 40318924 40323176 Dod09g0198 09 2748556 2753293 PCT