Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1533 ATGATCTTGCTCTTGATATTCCATCTGCTAAAGCCTTGTTTCAGTCAGTTGGTTCCCAAGGCAATATCTGAAGGATGGCTTGATTCTTCATTTATGAAACCTGCTGGTGAGGATGGAGAAATTCAAGTTGAAGATGAGAAGGTCAGGAAATACAAAAAGGAGGCTGTAACTATAATACATGAGTATTTTCTTTCTGATGACATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGGTGCACCTGAGTATAACCCAATATTTCTGAAGAAGCTAATAACTCTTGCCATGGACAGAAAGAACAGAGAAAAGGAAATGGCATCTGTTCTGCTATCTGCTCTTCATATAGAGATCTTCTCGACAGAGGACATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCAGAAGATACAGCACTGGATATATTGGACGCTTCAAATGAACTTGCTCTCTTTTTAGCTAGGGCTGTGATTGATGATGTATTGGCACCTCTGAATTTAGAAGAAATCAGCAGCAGGTTGCCACCAAAAAGCAGTGGGAGTGAAACTGTGCGTATGGCTCGGACACTCGTAGCTGCTCGTCATGCTGGTGAGAGGCTATTGAGATGTTGGGGTGGTGGGACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGCTCTTGGAGGAGTACGAAAGTGGCGGGGTTGTGAGTGAAGGTTGCCAGTGTATTCGAGACCTTGGAATGCCATTCTTTAACCATGAGGTGGTTAAGAAAGCTTTGGTTATGGCCATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAGGGCTTCAGTGAAGGTTTGATCACCATCAATCAGATGACTAAAGGGTTCACCCGAATCAAGGATAGTCTTGATGATCTGGCTCTGGATATTCCAAACGCAAAGGAGAAATTTGGCTTCTACGTGGAGTATGCCAGGACCAAGGGATGGCTTCTACTCTCATTTGAATTGTCTGCCGCAGATGCTTAA 1002 0.4411 MILLLIFHLLKPCFSQLVPKAISEGWLDSSFMKPAGEDGEIQVEDEKVRKYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEISSRLPPKSSGSETVRMARTLVAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEGCQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQEGFSEGLITINQMTKGFTRIKDSLDDLALDIPNAKEKFGFYVEYARTKGWLLLSFELSAADA* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1533 333 Pfam MA3 domain 52 161 IPR003891 -
Dod05g1533 333 Pfam MA3 domain 215 322 IPR003891 -
Dod05g1533 333 Gene3D - 41 193 - -
Dod05g1533 333 ProSiteProfiles MI domain profile. 50 171 IPR003891 -
Dod05g1533 333 SUPERFAMILY ARM repeat 210 326 IPR016024 -
Dod05g1533 333 Gene3D - 201 327 - -
Dod05g1533 333 ProSiteProfiles MI domain profile. 213 332 IPR003891 -
Dod05g1533 333 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 13 330 - -
Dod05g1533 333 SUPERFAMILY ARM repeat 48 206 IPR016024 -
Dod05g1533 333 PANTHER PROGRAMMED CELL DEATH 4 13 330 IPR039778 GO:0045892
Dod05g1533 333 SMART ma3_7 51 162 IPR003891 -
Dod05g1533 333 SMART ma3_7 214 323 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1533 Dod-Chr5 40236644 40237645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1533 217 313 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 3.24e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1533 - - gmx:100815729 572.778