Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1527 ATGGTAATCAATAGCAGTGCTGAAGATAGGAGGAAGTCTTCTGATTTGGAGTTGGAGAGAGAAAATGAGTGTGGCATCTGCCTAGAGTCTTGCACCAAGATGGTCCTGCCTAATTGCTGCCATGCCATGTGTATAAATTGCTACAATGACTGGAACACAAGGTCAGAATCTTGTCCATTTTGCCGGGGAAGTTTGAAGAGAGTTAAGTCAGGGGATTTGTGGGTCCTAACATGCAGTAACGATGTTGTTGATGTGCAAACTATATACAGAGAAGATATATTGCGCCTTTTTCTCTTTGTAAACAACCTTCCTGAATTTATCCCAGATGCTCTTTCCTTAATGTATTACGAGTACTTAATTTAA 363 0.405 MVINSSAEDRRKSSDLELERENECGICLESCTKMVLPNCCHAMCINCYNDWNTRSESCPFCRGSLKRVKSGDLWVLTCSNDVVDVQTIYREDILRLFLFVNNLPEFIPDALSLMYYEYLI* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1527 120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 72 IPR013083 -
Dod05g1527 120 SMART ring_2 24 61 IPR001841 -
Dod05g1527 120 PANTHER OS01G0905700 PROTEIN 1 120 - -
Dod05g1527 120 ProSiteProfiles Zinc finger RING-type profile. 24 62 IPR001841 -
Dod05g1527 120 SUPERFAMILY RING/U-box 14 68 - -
Dod05g1527 120 PANTHER RING FINGER PROTEIN 41, 151 1 120 - -
Dod05g1527 120 Pfam Ring finger domain 22 62 IPR001841 -
Dod05g1527 120 ProSitePatterns Zinc finger RING-type signature. 39 48 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1527 Dod-Chr5 40183944 40186221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1527 24 66 C3H Transcription Factor Family AT5G01960 37.209 6.29e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1527 - - qsu:112000041 209.534