Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1503 ATGGACATCGTAATAGAAGGTCTCTCCGGCGCCCACTTCTCCGGTTGGCGACCTTCGACCACGTCGCCTCCTCCTTCTCCCTCTTCTCCACTCCAATCCTTCGTCATCGGGGTCTCTGGAGGCACTGCATCGGGTAAGACCACAGTGTGTGAGTTGATCATTCAGCAACTGCAAGATCACAGAGTTGTGCTTGTTAGTCAGAATTCGTTTTACCGTGGTTTAACGAATGAAGAGCTGAAACACGTTCATGAGTATAATTTTGATCATCCAGTATTATTTTATTTTGTTTTATTTATTTATTTATTTTTTACTATTTGGCAGGTGAATGCATCTGAAGTAATAATTCTGGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAAATATTTGTTGATGCAGATCCAGGTGTAAGGCTTGCCCGCAGGATAAGGCGTGATACTGTTGAGAGGGGTAGAGATGTACACTCCTATGTTAAATTTGTTAAGCCAGCCTTCGATGATTTTATTCTTCCATCCAAGAAGTACGCTGACATCATCATACCTCGTGGGGGAGATAATCATGTGGCAATCGACTTGATAGTTCAACATATCCGCACAAAGCTTGGCCAGCATAACCTCTGCAAGATATATCCAAATTTGAATGTGTTACAGTCTACTTTTCAGACTAGAGGCATGCATACTCTTATTCGCGACAGGGACATATCAAAGCATGATTTTGTGTTTTATTCTGATCGGCTAATTCGTTTGGTAGGTAATGACATGAAATTTCTGCATGATTTGGTTATTAACAAAATAATCTTATTATCACTGACTTCACAGGTAGTGGAACACGGTCTTGGTTACTTGCCATTTAAAGAGAAACAAGTTATCACACCTACAGGGTCACTTTATATTGGAGTTGATTTTTGTAAGAAGTTGTGCGGAGTATCTGTTATCCGAAGTGGCGAAAGCATGGAAAATGCTTTGCGTACATGCTGTAAAGGAATAAAAATAGGAAAGATACTCATCCACCGTGAAGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCAAAAGATATTTCAGAGAGACACGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAACACTGCCAGCCAAGCAGTTGAGCTTCTTATAAATAAAGGAGTTCCAGAGTCCAATATAATATTCCTCAACCTCATCTCAGCTCCTGAGGGAATACATAATTTATGTACATGTTTTCCACAAGTCAAAATTGTCACTTCGGAGATTGACGAGGGAATAAATGAACAGTTCCGTGTGATACCAGGGTTAGGAGAATTTGGTGACCGCTATTTTGGTACGGACGACTCTTAG 1356 0.4071 MDIVIEGLSGAHFSGWRPSTTSPPPSPSSPLQSFVIGVSGGTASGKTTVCELIIQQLQDHRVVLVSQNSFYRGLTNEELKHVHEYNFDHPVLFYFVLFIYLFFTIWQVNASEVIILEGILVFHEQRVRNMMNMKIFVDADPGVRLARRIRRDTVERGRDVHSYVKFVKPAFDDFILPSKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHNLCKIYPNLNVLQSTFQTRGMHTLIRDRDISKHDFVFYSDRLIRLVGNDMKFLHDLVINKIILLSLTSQVVEHGLGYLPFKEKQVITPTGSLYIGVDFCKKLCGVSVIRSGESMENALRTCCKGIKIGKILIHREGDETQLIYEKLPKDISERHVLLMDPVLGTGNTASQAVELLINKGVPESNIIFLNLISAPEGIHNLCTCFPQVKIVTSEIDEGINEQFRVIPGLGEFGDRYFGTDDS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1503 451 PANTHER URIDINE KINASE 276 447 - -
Dod05g1503 451 Gene3D - 210 448 IPR029057 -
Dod05g1503 451 PANTHER URIDINE KINASE 106 257 - -
Dod05g1503 451 PANTHER URIDINE KINASE 13 93 - -
Dod05g1503 451 PANTHER URIDINE KINASE 106 257 - -
Dod05g1503 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 199 IPR027417 -
Dod05g1503 451 Pfam Phosphoribulokinase / Uridine kinase family 109 194 IPR006083 GO:0005524|GO:0016301
Dod05g1503 451 Gene3D - 103 209 IPR027417 -
Dod05g1503 451 Gene3D - 31 102 IPR027417 -
Dod05g1503 451 PANTHER URIDINE KINASE 13 93 - -
Dod05g1503 451 SUPERFAMILY PRTase-like 209 449 IPR029057 -
Dod05g1503 451 Pfam Uracil phosphoribosyltransferase 276 448 - -
Dod05g1503 451 PRINTS Uridine kinase signature 63 74 - -
Dod05g1503 451 PRINTS Uridine kinase signature 33 50 - -
Dod05g1503 451 ProSiteProfiles UvrC family, homology region profile. 116 195 IPR001162 GO:0009381
Dod05g1503 451 CDD PRTases_typeI 303 421 IPR000836 -
Dod05g1503 451 PANTHER URIDINE KINASE 276 447 - -
Dod05g1503 451 CDD UMPK 35 206 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1503 Dod-Chr5 39950279 39960141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1503 1 450 PRT Gene Family AT3G27190 67.000 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1503 K00876 - gmx:100816209 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1503 05 39950279 39960141 Dod05g1503 05 39950279 39960141 ECH