Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1497 ATGGTGAGGTCTGGTTACGAAAGAGAGTGCCTTCAGGTTTATAGCAGCGTTCGCCGTGACGCTTTCGATGAGTGTTTGGTTATTCTTGGCGTTGAGAGGTTGAGTATTGAAGAGGTTCATAGGGTTGAGTGGAAGGTTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTTAAGATTGGTGTTGGTGTGGTGTTGAGTGGGGAGAAGAGGCTTTGTGAGAGTGTTTTTGGGGAGTTGGATGAGGTCAAGGAGTTTTGTTTCAATGAGATTGCAAAAAATTGTGTTATGCAGCTGTTGAATTTCGGCGAGGCCGTTGCTATTTGTAAGAGGTCTCCTGAGAAGTTGTTTAGGATATTGGATATGTATGAGGCTTTGAGGGATGCTTTGCCTGATTTGCAGGCTTTGGTTTCGGATGAGTTTGTGATTAGTGAGGCCAGGGGAGTGCTGAGTGGACTAGGCTTGGCCGCGGTGGCGACTTTTGCTGAGTTTGAGAATCGTATTAGGAATGAGAATTCCAAGAAGCCGGTTGTTAATGGGGATGTTCATCCATTGGCACGTTATGTGATGAACTACCTGAAGTTGCTTGTGGTTTACAGCGACCCCTTGGACTCTCTTTTGGACATAAGAGAAGAGGATGTGTATAGGTTTGAACATGATTTTGGGGGTGATGGTTCCCAGTTCGCCGCCATGTCCCCCTTAGGACAACGAACGCTGTTGTTGATGTCTGAGCTTGAGTATAACCTTGAGGAAAAATCAAGGCTTTATGAGGACCATGCAATGCAGCATGTGTTTTTGATGAACAATCTCCATTACTTTGTGCGGAAAGTGAAAGACTCGGATCTTGGGAAGGTCTTGGGGGATGATTGGATCCGGAAGCGCCGCGGCCAGATACGCCAGAATGCTACTGGCTATCTCAGAGCCTCTTGGACCAAGGTCTTGGCTTGTTTGAAGGATGAAGGGATCGGAGGGAGCTCTAGTGGTAAAGCCTCAAAGATGGCTTTGAAGGAGAGGTTCAAGAATTTCAATGTGTGTTTTGAAGAAATATATAGGGTTCAGACTGCTTGGAAGGTACCAGATGATCAGCTTCGCGAAGAGCTGCGAATATCTATATCAGAGAAGGCAATTCCTGCATACCGCTCGTTCGTGGGGAGATTTAGCGGTCATCTTGATGGAAAGGATGCTGGGAAATACATCAAGTATACACCAGAGGATATAGAAAACTATTTATTGGATTTATTTGAAGGATCCCCTGCTGTGTTGCACCACTTAAGGAGAAAAAGTACATAG 1290 0.4558 MVRSGYERECLQVYSSVRRDAFDECLVILGVERLSIEEVHRVEWKVLDEKMKNWVQAVKIGVGVVLSGEKRLCESVFGELDEVKEFCFNEIAKNCVMQLLNFGEAVAICKRSPEKLFRILDMYEALRDALPDLQALVSDEFVISEARGVLSGLGLAAVATFAEFENRIRNENSKKPVVNGDVHPLARYVMNYLKLLVVYSDPLDSLLDIREEDVYRFEHDFGGDGSQFAAMSPLGQRTLLLMSELEYNLEEKSRLYEDHAMQHVFLMNNLHYFVRKVKDSDLGKVLGDDWIRKRRGQIRQNATGYLRASWTKVLACLKDEGIGGSSSGKASKMALKERFKNFNVCFEEIYRVQTAWKVPDDQLREELRISISEKAIPAYRSFVGRFSGHLDGKDAGKYIKYTPEDIENYLLDLFEGSPAVLHHLRRKST* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1497 429 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 421 - -
Dod05g1497 429 SUPERFAMILY Cullin repeat-like 1 415 IPR016159 -
Dod05g1497 429 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 421 IPR004140 GO:0000145|GO:0006887
Dod05g1497 429 Gene3D Exocyst complex component Exo70 1 421 - -
Dod05g1497 429 Pfam Exo70 exocyst complex subunit 52 411 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1497 Dod-Chr5 39867497 39870137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1497 1 428 EXO70 exocyst subunit family AT5G50380 63.014 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1497 K07195 - gmx:100818693 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1497 05 39867497 39870137 Dod05g1497 05 39867497 39870137 ECH
Dod09g0089 09 1242362 1248002 Dod05g1497 05 39867497 39870137 PCT