Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod05g1494 | ATGGTTCACATACTTTATCCACTTGCTGGTGGTAACCTTGTTCCTGGAGCTAGTGTGTTTGGCTATGGCAATGGAACAGCAAGTGGAGGGTCTCCAAAGGCACGTGTTGCAGCCTATAAGGTGTGTTGGCCATCGGTTACCAAAGGTGAAGGGGGATGTGCTGATGCAGACATTTTGGATGCTTTTGAAGCTGCCATAAGTGATGGGGTTGATGTGCTTTCAGTATCACTTGGTGCCCCTCAACCCATTGAGTTTGTTGATAGTGGAACTTCCATTGGGTCCTTCCATGCTGATGTTCACGGCATAGTAGTAGTGATTTCCGCTGGAAATTTTGGACCAGATCCTAAAACAGTGGCTAATATGGAGCCATGGGTCATCACTTTTGCTGCTAGCACAATTGATCGAGACTTCACTAGTTATGTCAAACTTGGTGGCAATAAAATCCTCAAGAAGGCAAATGGGAAAATATTGGTTTGTGTTCGTGGTGGAGGTGGTAGAACTAAAAAGGGTGTAGAAGCTGCTCGGGTAGGAGCTGTTGGAATGATTTTGGCTAATGATGCTCAAACAGGGAATGAACTCATGGCTGACCCTCATGTCCTTCCAGCTTCACATGTTAACTTTACTGATGGCACTTACATTTTATCTTACATCAATGGCACCAAGTCTCCGGTGGCTACCATTTCTAATGTGAAAACAGAATTGGGCAGAAAGCCATCTCCAGTTGTGGCTTCATTTTCATCAAGGGGGCCAAATGCCCTTGAGCCATCAATCCTCAAGCCCGACATCACTGCACCAGGAATCGACATCATTGCTGCTTATAGTGAAGCTGCATCTCCAACAGATCAACCACATGATAAACGCAGAATTCCTTACATTGCCATGTCTGGAACTTCAATGTCATGTCCCCATGTTTCTGGCGTTGTCGGGCTACTCAAATCACTTCACCCTGATTGGAGTCCAGCAGCTATTAAGTCAGCAATAATGACCACAGCAAGAACAAGAGATAACACCAGAAAGCCAATGCTGAATGCAACTCTAGAAGAAGCGACTCCATTTGACTACGGTGCAGGCCATATTGAACCAAACCTTGTAGCGGAACCCGGGACTTGTGTATGA | 1116 | 0.457 | MVHILYPLAGGNLVPGASVFGYGNGTASGGSPKARVAAYKVCWPSVTKGEGGCADADILDAFEAAISDGVDVLSVSLGAPQPIEFVDSGTSIGSFHADVHGIVVVISAGNFGPDPKTVANMEPWVITFAASTIDRDFTSYVKLGGNKILKKANGKILVCVRGGGGRTKKGVEAARVGAVGMILANDAQTGNELMADPHVLPASHVNFTDGTYILSYINGTKSPVATISNVKTELGRKPSPVVASFSSRGPNALEPSILKPDITAPGIDIIAAYSEAASPTDQPHDKRRIPYIAMSGTSMSCPHVSGVVGLLKSLHPDWSPAAIKSAIMTTARTRDNTRKPMLNATLEEATPFDYGAGHIEPNLVAEPGTCV* | 372 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod05g1494 | 371 | Gene3D | Peptidase S8/S53 domain | 235 | 368 | IPR036852 | GO:0004252|GO:0006508 | |
| Dod05g1494 | 371 | Gene3D | Peptidase S8/S53 domain | 9 | 133 | IPR036852 | GO:0004252|GO:0006508 | |
| Dod05g1494 | 371 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 365 | - | - | |
| Dod05g1494 | 371 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 8 | 146 | IPR045051 | - | |
| Dod05g1494 | 371 | Pfam | Subtilase family | 24 | 340 | IPR000209 | GO:0006508|GO:0008236 | |
| Dod05g1494 | 371 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 8 | 146 | - | - | |
| Dod05g1494 | 371 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 150 | 368 | - | - | |
| Dod05g1494 | 371 | CDD | PA_subtilisin_like | 150 | 227 | - | - | |
| Dod05g1494 | 371 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 150 | 368 | IPR045051 | - | |
| Dod05g1494 | 371 | Gene3D | - | 151 | 234 | - | - | |
| Dod05g1494 | 371 | Gene3D | - | 134 | 150 | - | - | |
| Dod05g1494 | 371 | Pfam | PA domain | 138 | 211 | IPR003137 | - | |
| Dod05g1494 | 371 | SUPERFAMILY | PA domain | 151 | 220 | IPR046450 | - | |
| Dod05g1494 | 371 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 296 | 306 | IPR023828 | - | |
| Dod05g1494 | 371 | SUPERFAMILY | Subtilisin-like | 20 | 367 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod05g1494 | Dod-Chr5 | 39822772 | 39825548 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod05g1494 | 9 | 368 | Subtilisin-like Serine Gene Family | AT5G59810 | 53.102 | 6.06e-137 | 407 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod05g1494 | - | - | tcc:18593208 | 471.47 |