Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1493 ATGGCGTCTCTGCACCACACCACCACAGCCTCACTCCCCTCCACTCAAACCCCAAGAAGAACCCTCCTCACCCCCAAACCCATCCTCAACTTCTCCCTCTCCACCACCACCTTCCCCTCCCTCAAACTCACCACGCGGCGCCGCCGCTCCGGCGGCTCGGCCCTCGGCGCCCGAATGGTGTCCACCGCCGCCGCCAGCTACGCTCTCGCCCTCGCCGACGTGGCCAAGTCCAGCAACACCCTCGACGCCACCAGCGCCGACGTCGAGAAAATCGACGAGATCTTCTCCGACCCACCGGTCTTCGACTTCTTCGCCAACCCAACCATCGAAGCCGACAAGAAGAAAAATTTAGTTGAAGAAATTGCCAAGTCATCGAGCTTCCAGCCCCACACGCGCAACTTCCTGAACATCCTCGTCGACGCGAAGAGGATCGGGCTTGTGAAGGAGATCGCGAAGGAGTTCGAGTTCGTGTACAACACGCTCACGGACACGGAGCTTGCTGTTGTGAGCTCCGTGGTGAAGCTTGAGTCGCAGCACCTTGCGCAGATCGCAAAGCAGGTGCAGAAGCTTACGGGTGCGAAGAACGTGAGGATCAAGACCGTTATTGACCCAAGCTTGGTGGCTGGGTTCACAATCAGGTACGGGAACACGGGGTCAAAGCTGATTGACATGAGTGTTAAGAAGCAGCTTGAGGAAATCGCTGCTCAGCTTGATTTGGGTGATATCAAACTCACTGTATGA 741 0.5749 MASLHHTTTASLPSTQTPRRTLLTPKPILNFSLSTTTFPSLKLTTRRRRSGGSALGARMVSTAAASYALALADVAKSSNTLDATSADVEKIDEIFSDPPVFDFFANPTIEADKKKNLVEEIAKSSSFQPHTRNFLNILVDAKRIGLVKEIAKEFEFVYNTLTDTELAVVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGNTGSKLIDMSVKKQLEEIAAQLDLGDIKLTV* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1493 246 Pfam ATP synthase delta (OSCP) subunit 64 237 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 PRINTS ATP synthase delta subunit signature 132 143 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 PRINTS ATP synthase delta subunit signature 194 209 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 PRINTS ATP synthase delta subunit signature 143 157 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 PRINTS ATP synthase delta subunit signature 212 230 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 PANTHER ATP SYNTHASE DELTA CHAIN 38 245 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 Gene3D - 63 155 IPR026015 -
Dod05g1493 246 Hamap ATP synthase subunit delta [atpD]. 59 239 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 196 215 IPR020781 GO:0015986|GO:0016020|GO:0046933
Dod05g1493 246 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 59 162 IPR026015 -
Dod05g1493 246 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 64 237 IPR000711 GO:0015986|GO:0046933
Dod05g1493 246 MobiDBLite consensus disorder prediction 1 23 - -
Dod05g1493 246 PANTHER BNACNNG66500D PROTEIN 38 245 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1493 37 244 Primary Pumps ATPases AT4G09650 67.308 3.36e-99 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1493 K02113 - tcc:18594548 314.309