Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1484 ATGGGTAAGGCGTCAAAGTGGTTTCGCAGTCTTCTTGGTCTCAAAAAACCAGACCCTACTACTACTAATTCATCTCCCAAGCCACCGAAACACAAACGCCGATGGAGCTTCGTCAAATCATACAGAGAATTAGAAGAAGAAAACGACGACAACAACAACAACATTGATGATAATAACCACGCTAACAGTACTGCCATACACGTACAACACGTGGACGCTGCCGCCGATCCTACCAAGCGCGCCATCGCAGTTGCAGCCGCCACCGCGGCCGTGGCCGAGGCTGCCGTCGCTGCAGCTCAGGCTGCCGCAGTCGTCGTCAGACTGACTAGCAGCAGCGGCAGGTGCGCCGCCGCCTCTGGCATCACCGCTACCCGCCAAGAATGGGCCGCCGTTAAGATTCAAGCTGCATTCCGAGGCTGTCTGGCAAGGAGAGCACTGCGAGCATTGAAGGGGTTGGTGAAGCTGCAGGCACTGGTGAGGGGTCACATTGAGAGGAAGAAGACAGCAGAGGAGCTGAAAAGAATGCAAGCTCTCTTACGAGCACAGGCAAGAGTCCGTGCAGGGCGGGCTCTGACTCAGATCCTCCACACCTCAAATTCCACTTCTAAGTCATCTTCGTGCCACCTCCATGGTCCAGCTACGCCAGACAAGTATGAGAGCCCAATCAGATCCAAGAGCATGAAACATGATCAGTCACCAGTACTCAAGAGAAATGGCTCCAAATCGTGTGTCCTGATCAATGGAAACAACAGAGAGAGATATAGGAATAAATCAGAAAGCCACATAGATGAACAATCATGGACTCAAGAAAGATCATCTATAAGAACCTGCAGCACCAATGATGAAAAAAGTGATAGGAATCTTGAAGTTGACTCTGGAAAACCACGAGCCACATCAAAACGTAGGAACCTCTTTCCCTCCACCAGTAATCATGCTATAGTCTCTGATCATTATAGTAAGAGTTGGACCACAACAAAGGACTCAACAACTTCACTTCAATCAGGCCAGAGTCTATCTTGTGAAGTTCAGTCTCACATGGTTGAGGAGAGCCCATTTTGCACTGCTGAAAATAGCCCTCAGTTCTTATCTGCATCTTCCAAAGATAATGGCCCCAAAACAAGCCCTTTTACCCCTAATAGGAGTGAAGGCTCAAGGAGCTACATCTGTGGATATTCTGACAACCCAAGTTACATGGCATACACTGAGTCTTCAAAGGCCAAAGTCAGGTCTCTCAGTGCCCCAAAACAAAGGCCCCAATATGAGAGGACCAGTTCATCTCATAGGTACTCACTCAATGGATTTGGTGCACAGAGGGCATTTGCATTGCAAGCAAGCTTCACAAGCAAAGCCTATCCTGGTTCTGGCCGATTGGACAAGCTTGGTATGCCTATGGGATATAGATACTAA 1407 0.489 MGKASKWFRSLLGLKKPDPTTTNSSPKPPKHKRRWSFVKSYRELEEENDDNNNNIDDNNHANSTAIHVQHVDAAADPTKRAIAVAAATAAVAEAAVAAAQAAAVVVRLTSSSGRCAAASGITATRQEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKKTAEELKRMQALLRAQARVRAGRALTQILHTSNSTSKSSSCHLHGPATPDKYESPIRSKSMKHDQSPVLKRNGSKSCVLINGNNRERYRNKSESHIDEQSWTQERSSIRTCSTNDEKSDRNLEVDSGKPRATSKRRNLFPSTSNHAIVSDHYSKSWTTTKDSTTSLQSGQSLSCEVQSHMVEESPFCTAENSPQFLSASSKDNGPKTSPFTPNRSEGSRSYICGYSDNPSYMAYTESSKAKVRSLSAPKQRPQYERTSSSHRYSLNGFGAQRAFALQASFTSKAYPGSGRLDKLGMPMGYRY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1484 468 MobiDBLite consensus disorder prediction 1 35 - -
Dod05g1484 468 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Dod05g1484 468 Coils Coil 41 61 - -
Dod05g1484 468 MobiDBLite consensus disorder prediction 276 298 - -
Dod05g1484 468 MobiDBLite consensus disorder prediction 236 251 - -
Dod05g1484 468 Pfam IQ calmodulin-binding motif 128 147 IPR000048 GO:0005515
Dod05g1484 468 Gene3D - 123 179 - -
Dod05g1484 468 SMART iq_5 125 147 IPR000048 GO:0005515
Dod05g1484 468 SMART iq_5 148 169 IPR000048 GO:0005515
Dod05g1484 468 PANTHER IQ-DOMAIN 5-RELATED 1 463 - -
Dod05g1484 468 MobiDBLite consensus disorder prediction 196 306 - -
Dod05g1484 468 Pfam Protein of unknown function (DUF4005) 358 430 IPR025064 -
Dod05g1484 468 MobiDBLite consensus disorder prediction 252 268 - -
Dod05g1484 468 MobiDBLite consensus disorder prediction 358 385 - -
Dod05g1484 468 MobiDBLite consensus disorder prediction 221 235 - -
Dod05g1484 468 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Dod05g1484 468 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1484 Dod-Chr5 39693600 39701502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1484 1 468 IQD Protein Family AT4G23060 42.966 6.52e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1484 - - ahf:112805329 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1484 05 39693600 39701502 Dod02g1068 02 13337060 13340890 PCT