Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1481 ATGTCCATTCGATCCCCTTCAAGTTCCATCCTCTTCACCACCTATGCTCTCGCGAGTCCTCAACCTCTCGCTTCTCCACCCCTTCGAAGAGGCTCCCCAGTTGGTGGCTCCAGCGAGACCGAGAGCGATGAGGACGAGCACCTCCACCGAGAAGTCAAGTTGAGTCACCGAGTCACTCTTTCCACCATCCTCAACGCCGATTCTAAAACCTCTGAGAAATCCATGGGTGGGTTTATGTCTGGTTTGCCGCAATTGACGCTGTGCGAGTTCAATAGTGGGTGTGGTTACTGCAAGGGTTTGAGCCAGAGAAGCCCGAACAGCGCGTGCAACTTGTACTCCGCGAAGGATATAATTCATATATCAGATAAAGAGATTGCCTTCCTGGTGGACATGGTGGCTCGCTTCTTCGTGGCGTACTGGGACACCAACTCCTACTACATTGTGTACAGCCCCTCCTGGATCGCCACGCACTACCTCAGGTTCTGTCCCACTGATGAGGAGTTGATCTCTTATTACCTTAGGAAGAAGCTTGAAGGCCATGAAGAGAGCGTTCAAGTCATTGTCGAGATTGAGCTTTGCAAATTTGAGCCTTGGGATTTGTCAGAAGAAGAAAGAAACCCTTGCGAACAGAGAAAAAGAAAGCTCGCGCAACCCCCCGCTGGTCCGCCACCATCTTCTTCCCAGGCGCTGCTCGCCCCCGGCTCAGCCAACATCACGCCAGCCTTGCCACTTGCCGGAAAACGCCGCTGCTCCTTCCTTGCCAGTAAAGCCGCCACCTTCCTCTCTGCTGTTCTTCGCCGAAGCAGCTCGCAAGCCGCCCCTCCATCGCTAGCCTCCTCTACTGCCAGATCTGTGAAGCAGCTCTCGGCCTCCGCCATCAATCGCGAAGAACAGCCTCAAAGCATCGCGGAGAAGCAGAGCATAAGCAAATCTACGAAGGGAGCAGAACCAGACGCTGCTCACAGCCGTCGTTCACATCTTCATTCATCATCCTCGCTCCTCCATTCGTCTTGTTGTTCACGTGGCTTACTCTATTGTTCATTGCAGCTTCGCTTGCCATCATTCACACCTCCGCTTGTCGTTGTTTACATGTGTGAATTGTGA 1104 0.5317 MSIRSPSSSILFTTYALASPQPLASPPLRRGSPVGGSSETESDEDEHLHREVKLSHRVTLSTILNADSKTSEKSMGGFMSGLPQLTLCEFNSGCGYCKGLSQRSPNSACNLYSAKDIIHISDKEIAFLVDMVARFFVAYWDTNSYYIVYSPSWIATHYLRFCPTDEELISYYLRKKLEGHEESVQVIVEIELCKFEPWDLSEEERNPCEQRKRKLAQPPAGPPPSSSQALLAPGSANITPALPLAGKRRCSFLASKAATFLSAVLRRSSSQAAPPSLASSTARSVKQLSASAINREEQPQSIAEKQSISKSTKGAEPDAAHSRRSHLHSSSSLLHSSCCSRGLLYCSLQLRLPSFTPPLVVVYMCEL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1481 367 MobiDBLite consensus disorder prediction 288 313 - -
Dod05g1481 367 Gene3D NAC domain 164 215 IPR036093 GO:0003677|GO:0006355
Dod05g1481 367 Pfam No apical meristem (NAM) protein 159 204 IPR003441 GO:0003677|GO:0006355
Dod05g1481 367 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 160 201 - -
Dod05g1481 367 MobiDBLite consensus disorder prediction 288 328 - -
Dod05g1481 367 SUPERFAMILY NAC domain 159 203 IPR036093 GO:0003677|GO:0006355
Dod05g1481 367 MobiDBLite consensus disorder prediction 206 232 - -
Dod05g1481 367 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 160 201 - -
Dod05g1481 367 MobiDBLite consensus disorder prediction 20 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1481 Dod-Chr5 39623162 39633956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1481 159 205 NAC Transcription Factor Family AT2G27300 65.957 1.74e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod05g1481 NAM 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1481 - - gsj:114373381 86.2705