Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1474 ATGGACATCTTCGTACAATCATTTGACAATTACCGTTCATGTTCATCGTATTCATCGGAAACTGCTAGCTCCTCCAATAACCCTTCGAACACTTACGAGGAAGTGATTTTGGCGTCCTCGAAGCCGAAGAAGCGTGCGGGGCGAAGAATATTCAAGGAGACGAGGCACCCAGTGTACCGAGGGGTGCGAAAGAAAAACAACAAGAAGTGGGTCTGCGAGGTTCGCGTTCCAAACAGCAAGTCCAGAAGGATATGGCTGGGGACCTACGCCACACCCGAGATGGCGGCGCGTGCGCATGACGTCGCCGCCCTAGCCCTTCGGGGGAAAGCGGCGTGCCTAAACTTTGCTGACTCGGCGTGGCGGCTGCCCCTCCCGGTGTCTGCAGACGCCGTGGAGATAAGGAGGGCGGCCGCCGAGGCTGCCGAGATGGATGCGGTTGAGGACGGTTATAACCGTCCGCAAATTTTGGACAATGCCGTTATTGATTATGAAGTTTGCAGCAGTGAAACCGTTGGGGTCGTGGAAGAAGCGAAGAAGCCGTTGATAGGGTTGTGCCTCGATGAAATTCGTGGTGTATCGGAATTTGAGGACGTTCATGATTGGCTTCGGAGTATGGCGGAAGAGCCTTTACGATCTCCGCCTCCTTTTGTGAGATATGGTAATTACAGGGAGTGGAACGATGTGGAGGCTGATGCTGAGGTGTCCCTGTGGAGCTTTACCATTTGA 726 0.5372 MDIFVQSFDNYRSCSSYSSETASSSNNPSNTYEEVILASSKPKKRAGRRIFKETRHPVYRGVRKKNNKKWVCEVRVPNSKSRRIWLGTYATPEMAARAHDVAALALRGKAACLNFADSAWRLPLPVSADAVEIRRAAAEAAEMDAVEDGYNRPQILDNAVIDYEVCSSETVGVVEEAKKPLIGLCLDEIRGVSEFEDVHDWLRSMAEEPLRSPPPFVRYGNYREWNDVEADAEVSLWSFTI* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1474 241 SMART rav1_2 58 122 IPR001471 GO:0003700|GO:0006355
Dod05g1474 241 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 241 IPR045277 GO:0003700
Dod05g1474 241 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1 241 - -
Dod05g1474 241 Pfam AP2 domain 57 108 IPR001471 GO:0003700|GO:0006355
Dod05g1474 241 Gene3D AP2/ERF domain 58 117 IPR036955 GO:0003700|GO:0006355
Dod05g1474 241 SUPERFAMILY DNA-binding domain 58 118 IPR016177 GO:0003677
Dod05g1474 241 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Dod05g1474 241 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Dod05g1474 241 CDD AP2 59 118 IPR001471 GO:0003700|GO:0006355
Dod05g1474 241 ProSiteProfiles AP2/ERF domain profile. 58 116 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1474 Dod-Chr5 39494335 39495515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1474 33 214 AP2-EREBP Transcription Factor Family AT1G12610 52.432 2.63e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod05g1474 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1474 - - gmx:100795696 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1474 05 39494335 39495515 Dod02g1057 02 13211651 13212924 PCT