Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1471 ATGGTTTCAATTAGTTCAGGCGAAATGTTGAGCAAGCATTATTCTCAAATGCAAACCACCAAAACAAAGCAGCAACACCTCCCGAGACCCTCCCTTTTGCTGAAGGATTACTTGATGAGGGACGACCTGAGCTCGTGCTCATCGAACGGCTTCAAATCGTTCCCGCGCCGACAATGCTGCAGCACCGTCGGATTAATCCTCGTGGAGAAAGATCTAAAACTCCAACAACAACGCAAGAGGAGGAGGAACAACAACACACTGCTACTCCTCCCTCAACCACCTCGTTCCACTTCTTCCTCCTCTTGTTCTTCTTCTAAGGTGGTATCGGTTCTTCAGAGAGCCTCAGAAGCTATTATCAACGCCATCAAGTCAATGCCGCCCTTGTCGTCACCCAAGAACGGTTCTGCTAAGAAAACCGCTGCTTCTGGCGTTCTTTCTAGAAGCTTCTCGAGGAGGCTTTTGAGTAGAAGCTTCTGGAGGAAAGCGGCGAAGGAAGATCATCAGGGTTCAGGCGAAGGGACGCAGAGGTGGAGGACGTCGTTCCGCGAATTGCTTATGCTGGAGCGAAACAAAACGGCGTCGCTGAATGAGGATAACATATTCACTGCCGTAAGCAGCAGCAGCAGCAGCGCCTCTTCATCGGGTTGTGGCAGTAACAACAGCTGGGGAGAGAGCGAGTTCACTTTTTCGTCTAGCACTGCAGCTGCGTCTGAGAGTTCCTCCGAAAACGACGTCGCTGAGGGCACAAAGGAGGTTGCGCTCCATCACAAGATAGAGGAAGTCACAAGGGATTGGCAAAACGTGGAGAAGGAACAATTTAGTCCTGTATCGGCGCTAGATTGCCCATTTGAAGATGATGAAGGGATTACGCCTCATTCCAATTCCACTACTCATTCCCTCTTGGAAGGAGCCGAACAGAAGAAGCATATACAGAAGAGAAGACATTTTGAAAGTGTGGCATCAGTGGAGCCCGTGGCCTTAGAGAAAAGGATGGCATGGCCAGAACCGGAAGAAGAAGAACCACACAACAATTCTACAAAACATGCAGTATCAGTCCCGATTATGTGTACGCAAAATGGTAAGACCAACGGGTTTCATTACAACATAGAGGACAACGCGCGCGACCTTCTTGACTTTGTTAAAAGATCGATTCCATCCAACTGTTTGGTAATTAAAGCACAGAGCCTGCTTTTTGATTACTTCAAGCAAAGCATTGGGGAAAGCATTATTGATATAGATCATAATTATCAATCAAAGAAGCTTCACCTTTGCAACGTGGCAGAGGATTGGGTACAAGGGCAACCCGAAGACGTGTATCTGGGTTGGGAAGTGCAGGAAGGAAGGCAAATCTACGTTAAGGAGATGGAAAAGTGTGTGGAGTGGAGAAACACTGATCACGAAGTGCAACATCTTGCCCTGGAGCTGGAGAACGAGGTCTTCGCTAGTTTGGTCAACGACCTCATAGTTGATTACCTGACTATGCACTAA 1488 0.4798 MVSISSGEMLSKHYSQMQTTKTKQQHLPRPSLLLKDYLMRDDLSSCSSNGFKSFPRRQCCSTVGLILVEKDLKLQQQRKRRRNNNTLLLLPQPPRSTSSSSCSSSKVVSVLQRASEAIINAIKSMPPLSSPKNGSAKKTAASGVLSRSFSRRLLSRSFWRKAAKEDHQGSGEGTQRWRTSFRELLMLERNKTASLNEDNIFTAVSSSSSSASSSGCGSNNSWGESEFTFSSSTAAASESSSENDVAEGTKEVALHHKIEEVTRDWQNVEKEQFSPVSALDCPFEDDEGITPHSNSTTHSLLEGAEQKKHIQKRRHFESVASVEPVALEKRMAWPEPEEEEPHNNSTKHAVSVPIMCTQNGKTNGFHYNIEDNARDLLDFVKRSIPSNCLVIKAQSLLFDYFKQSIGESIIDIDHNYQSKKLHLCNVAEDWVQGQPEDVYLGWEVQEGRQIYVKEMEKCVEWRNTDHEVQHLALELENEVFASLVNDLIVDYLTMH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1471 495 MobiDBLite consensus disorder prediction 1 27 - -
Dod05g1471 495 MobiDBLite consensus disorder prediction 81 104 - -
Dod05g1471 495 PANTHER OS04G0572500 PROTEIN 20 491 - -
Dod05g1471 495 MobiDBLite consensus disorder prediction 76 104 - -
Dod05g1471 495 MobiDBLite consensus disorder prediction 1 28 - -
Dod05g1471 495 PANTHER OS04G0572500 PROTEIN 20 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1471 Dod-Chr5 39456845 39461561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1471 32 490 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 29.600 8.86e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1471 - - ahf:112803960 400.593