Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1467 ATGACGTCGTGTCACGAGGAAGAGGAGCACGAGATGGACCAAGACGAGGACGACGACGGAGGAACCACCGACCTCAGCACCAGCGACGCCGACCCAGACAGAGACCCATCCGCACCCACAACAACCACCACCACCGCCAACAACAACAATGGACTCCCCAAACAGAAATTATTCTTAGACACCACCACCACCACAAGAGGCTTCCAAGCCTTACCCTTGAAAGACGAACCCGCGACGGATTCCGACCCGGACCACAAGGCCCACCCGATTGCCCCACTGGGCCTCGTTCCCGTCGGGATGCAGATGCAGCAGCTGCCCGTTCCCGTGCCCGTGAAGCCCGCGACGCGGGCCTCCACGAAGGATCGTCACACAAAGGTGGAGGGCCGGGGCCGCAGGATCCGAATACCCGCCACATGTGCGGCCCGGATCTTCCAGCTGACGCGTGAGCTGGGCCACAAGTCCGACGGCGAGACCGTTAGGTGGCTTCTAGAACACGCCGAGCAGGCCATCATCGAGGCCACCGGGACCGGGACCGTCCCCGCCATCGCCGTCTCCGTCGGCGGCACACTAAAAATCCCTACGACACGGCCTCCTCAAAACCCCGACGAAAACAGCAGCAGCAGCGCCGCTAAGAAACGGAAACTGCCGTCCAACAGCGAGTTCGTTGACCTGAGCAACGCCGTTTCGCAGTCGTCAGGTTTGGCGCCGGTTCAGCACGCGGTCCCGCAGGGTTTGGTTCCGGTGTGGGCCCTGGGGAACACGAGCATGGTGGTCCCCGCCAACGCGTTCTGGATGATTCGGCAGCCGGCTGCGGCGGCGAACCAGCAGGGTCAGATATGGGCTTTGGCGCCGTCGGTGACGCCGGTGTTCAACTTGGCCGCGGCGGCGGCAGCCAGGCCGTTAACGTCTTTGGTGGCGGGGACGAATGTTGCGGAGGTTTGGCCTGCGGCTGGTGGGGATTGCGGGAACACGTCGAACTCGGCGGTGAGTACGACCACGATGGGGCCTAAGGTGGCGAATAAGTCGAGCATGTCTGCGCCGAGTGTCAGTTCTGGCGGAAATGCTGCTGGTGCCGCCGCTAGTGGGAAGGCCCAGATGTTGAGGGGTTTTTCGTTGGAGATTTGCGATAAGCAAGAGTTGCAGTTCATGGGGACTCACCGCGCCCAACCTTCCAATCATTAA 1182 0.6227 MTSCHEEEEHEMDQDEDDDGGTTDLSTSDADPDRDPSAPTTTTTTANNNNGLPKQKLFLDTTTTTRGFQALPLKDEPATDSDPDHKAHPIAPLGLVPVGMQMQQLPVPVPVKPATRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTRPPQNPDENSSSSAAKKRKLPSNSEFVDLSNAVSQSSGLAPVQHAVPQGLVPVWALGNTSMVVPANAFWMIRQPAAAANQQGQIWALAPSVTPVFNLAAAAAARPLTSLVAGTNVAEVWPAAGGDCGNTSNSAVSTTTMGPKVANKSSMSAPSVSSGGNAAGAAASGKAQMLRGFSLEICDKQELQFMGTHRAQPSNH* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1467 393 MobiDBLite consensus disorder prediction 327 355 - -
Dod05g1467 393 MobiDBLite consensus disorder prediction 192 216 - -
Dod05g1467 393 Pfam TCP family transcription factor 118 194 IPR017887 -
Dod05g1467 393 MobiDBLite consensus disorder prediction 9 24 - -
Dod05g1467 393 MobiDBLite consensus disorder prediction 190 216 - -
Dod05g1467 393 ProSiteProfiles TCP domain profile. 119 173 IPR017887 -
Dod05g1467 393 MobiDBLite consensus disorder prediction 327 357 - -
Dod05g1467 393 MobiDBLite consensus disorder prediction 33 55 - -
Dod05g1467 393 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 389 IPR005333 GO:0003700
Dod05g1467 393 MobiDBLite consensus disorder prediction 1 55 - -
Dod05g1467 393 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 20 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1467 Dod-Chr5 39371692 39373458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1467 72 393 TCP Transcription Factor Family AT2G45680 44.092 8.58e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod05g1467 TCP 5.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1467 - - rcn:112180828 366.696