Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1449 ATGGAAATGAAAGCCATTCATTTCCTCATTCCTCTGTTTCTATTGGTTGTACTTCCCGGTCCGAAGTTGGCTCATGGAAACGCAGAACTAAGAGCTCTCATGGACATGAAATCCTCTCTGGACCCAGAAGGCAAGGTCCTTGGCTCTTGGACCAGTGATGGTGAACCATGCAGCGGTTCCTTCTTGGGTGTTGTGTGCAACCAGCACCTCAAAGTGGCCAACATATCATTGCCGGGTAGGGGTCTTTCTGGCAGGGTTTCTCCTTCAGTGGCTGAACTCAAATGCTTGTCAGGTTTATATCTGCATTACAACTGTATTTCTGGAGAGATACCAATAGAGATTTCAAATCTCACTGAATTGGTCGATCTCTATCTCAATGTGAACAACTTATCTGGCAGCATTCCTCTTGAGATCGGTAACATGGCTAGCCTACAAGTGCTGCAGTTAGGCTATAACCAGCTAGTGGGGAACGTACCAAGGGAGATGGGTTCGTTGAAGCGACTTAATACTCTGGCTTTGCAATATAACAAATTAACTGGTAATATTCCTCTAAACCTGGGGAACTTGCAGATGCTAAGGAGGCTAAATTTGAGCTTTAACAACTTCAATGGTATCATTCCTGCAACACTAGCCGATATTGCACCCTTGGAAGTTCTAGATGTTCAAAACAATTCTCTATCAGGAACTGTCCCTTCTGCATTGAGGAGATTAGGTGAAGGATTCCAAGGTACAAACAACCCAGATCTATGTGGAGTTGGCTTCTCTACTTTGAGAGCTTGCAGCAAAAATGCAAATATATACGGTAGCCAGATATCAACCTCAAATGTATCTATAAACAGTTATTCTCCAACATACTTCCCGGACTCCGCAAATACCAATTTGCATTGTAACCGGACACATTGCTCAAAATCAAGAAAATTTCCTCAAGCTATCATTACAGCAAGTGTTATAACTGCCACTATCGCATTCATTAGTGCCGGATTCATCACATATGTCAGATGTCGCCGCCAAAAGCAGAGGATTAGGCATACATCAGAGTCTTCTGAAGGTCAACTTAGTCCTGACCAGCCTGTAGAGTTCTACAGAAGAAGTCCATCTCCAATTGTTAATCTTAACTACTATTATAATGGATTGGATCCATTGGCTGATGGTCAAAATGGCACTGGATTATCCCATGAATATTTGAATAATTTCAGGTTTAATGTCGATGAGATTGAATCAGCGACACAGCACCTTTCCGAGGCCAATTTATTATGTAAGAGCAAATTCTCAGCAGTCTTTAAAGGAGTTCTCAGAGATGGTTCTCATGTGGCTATTAGAAGCCTCAGTGTAACATGCTGCAAACCCGAGGAAGATGAATTTGTGAAGGGGTTGAGCCTTCTAACCTCACTTAGACATGAAAACATTGTAAAGATGAGAGGTTTCTGTTGCTCAAATAGCAGAGGTGAATGTTTCCTTGTCTATGACTTTGCCAACCGGGGTAATCTCTCTCAATATCTTGACATGGCAGATGGAAGTGACCATGTGCTTGAGTGGTCCAAGAGGGTTTCCATCATCAAGGGCATTGCAAAAGGTATTGGATACCTGCACAGCAATGAACCAAGCAAACCTACAATCGTACACCAAGACATTTCTGTTGAAAAAGTTCTTCTTGACAATCAGTTTAACCCATTGATCATGGATGCTGGGCTCCCCAAGCTTCTTGCAGATGATGTGGTTTTCTCGGCACTGAAAGTAAGTGCTGCCATGGGGTACCTAGCTCCTGAATACATCACCACCGGACGCTTCACGGAGAAGAGTGACATTTACGCATTTGGTGTCATTGTTCTTCAAGTTCTGTCCGGGAAGACAACAATAGGCGGTTCGATCCGGGCAGCAGTAGAGTCTTCCAGGTTTGAAGATTTTGTGGACACAAATCTGAAGGGAAAATATTCAAAATCCGAAGCAGCTATTCTTTCAAAACTTGCAGTGTTGTGCACACATGAGCTTCCTGATCAAAGGCCAAACATGGTGGAGGTGATTCAGGAGCTGAGCGTGTTTCCTGCTCATTCTTCATGA 2058 0.4329 MEMKAIHFLIPLFLLVVLPGPKLAHGNAELRALMDMKSSLDPEGKVLGSWTSDGEPCSGSFLGVVCNQHLKVANISLPGRGLSGRVSPSVAELKCLSGLYLHYNCISGEIPIEISNLTELVDLYLNVNNLSGSIPLEIGNMASLQVLQLGYNQLVGNVPREMGSLKRLNTLALQYNKLTGNIPLNLGNLQMLRRLNLSFNNFNGIIPATLADIAPLEVLDVQNNSLSGTVPSALRRLGEGFQGTNNPDLCGVGFSTLRACSKNANIYGSQISTSNVSINSYSPTYFPDSANTNLHCNRTHCSKSRKFPQAIITASVITATIAFISAGFITYVRCRRQKQRIRHTSESSEGQLSPDQPVEFYRRSPSPIVNLNYYYNGLDPLADGQNGTGLSHEYLNNFRFNVDEIESATQHLSEANLLCKSKFSAVFKGVLRDGSHVAIRSLSVTCCKPEEDEFVKGLSLLTSLRHENIVKMRGFCCSNSRGECFLVYDFANRGNLSQYLDMADGSDHVLEWSKRVSIIKGIAKGIGYLHSNEPSKPTIVHQDISVEKVLLDNQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKTTIGGSIRAAVESSRFEDFVDTNLKGKYSKSEAAILSKLAVLCTHELPDQRPNMVEVIQELSVFPAHSS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1449 685 Gene3D Transferase(Phosphotransferase) domain 1 492 680 - -
Dod05g1449 685 PANTHER LEUCINE RICH REPEAT KINASE 2 13 679 - -
Dod05g1449 685 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 4-LIKE 13 679 - -
Dod05g1449 685 Pfam Protein tyrosine and serine/threonine kinase 416 677 IPR001245 GO:0004672|GO:0006468
Dod05g1449 685 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Dod05g1449 685 SUPERFAMILY L domain-like 30 236 - -
Dod05g1449 685 Gene3D Ribonuclease Inhibitor 27 306 IPR032675 -
Dod05g1449 685 Gene3D Phosphorylase Kinase; domain 1 384 490 - -
Dod05g1449 685 ProSiteProfiles Protein kinase domain profile. 412 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1449 685 SUPERFAMILY Protein kinase-like (PK-like) 391 678 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1449 Dod-Chr5 39026722 39030799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1449 12 525 Miscellaneous Gene Families AT4G22730 57.252 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Dod05g1449 PK_Tyr_Ser-Thr 1.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1449 - - gmx:100784155 984.171