Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1438 ATGGAAGCAAGTGGGGGCGGCATCACTGGTGGCGTTACGGTGGTCGGATCGGATGCTCCGTCGGACTTCCACGTAGCTCCGAGGACCGAAAACCCTTCTCCGCCAGTCGGATCCGCCGCGGCAATTCCTTCGCCGGCGCCGGCGAACCAAGGAGCTGCTCCGCAGCACCCCCCGCTGCATACGCCGGCTGTGACGGCGTCTCAGGCGACGATGCCGGCGAAGAAGAAGAGAGGCCGGCCTAGAAAGTACGGTCCGGACGGGTCGGTGGCGGTGGCGCTGTCTCCGAAGCCGATATCTTCGTCGGCGCCGTCATACATGCCGCCAGTGATCGATTTCTCGGCCGAGAAGCGCGGGAAGGTGCGGCCAGCTAGCTCAGTGAGCAAAGCCAGATTTGAAGTTGAGAATTTAGGTGAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACGCCCCATTTTATCACTGTTAATCCTGGGGAGGATGTTACTATGAAGGTAATATCATTTTCTCAGCAAGGGCCTCGAGCCATATGCATTATGTCAGCAAATGGTGTCATATCAAGTGTCACACTTCGTCAGCCGGATTCTTCTGGCGGCACATTGACATATGAGGGACGATTTGAAATTCTGTCCTTATGTGGCTCATTCATGCCAAATGAAACTGGGGGAACACGAAGCAGATCGGGTGGCATGAGTGTTGCTTTAGCCGGTCCAGATGGTCGTGTTATAGGTGGGGGAGTAGCTGGTCTATTGGTGGCTGCAAGTCCCGTGCAGGTAATTGTAGGCAGTTTTCTGGCAGGAAACCAACACGAGCAGAAGCCAAGAAAACAGAAACATGAGATTATATCGACTGTGACACCAACCGCGGTCGTTCCCATCTCTACTGCCGATCCGATTCCTATTCTGTCATCACCATCTTCGTTCCGCGGAGACAGTTGGTCTGCTATGCCAGTGGATGCCAAGAATAAGCCAGCAGACATTAATGTGTCACTTCCTGGAGGGTAA 1002 0.5419 MEASGGGITGGVTVVGSDAPSDFHVAPRTENPSPPVGSAAAIPSPAPANQGAAPQHPPLHTPAVTASQATMPAKKKRGRPRKYGPDGSVAVALSPKPISSSAPSYMPPVIDFSAEKRGKVRPASSVSKARFEVENLGEWVACSVGANFTPHFITVNPGEDVTMKVISFSQQGPRAICIMSANGVISSVTLRQPDSSGGTLTYEGRFEILSLCGSFMPNETGGTRSRSGGMSVALAGPDGRVIGGGVAGLLVAASPVQVIVGSFLAGNQHEQKPRKQKHEIISTVTPTAVVPISTADPIPILSSPSSFRGDSWSAMPVDAKNKPADINVSLPGG* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1438 333 CDD DUF296 149 263 IPR005175 -
Dod05g1438 333 Gene3D - 150 283 - -
Dod05g1438 333 ProSiteProfiles PPC domain profile profile. 145 287 IPR005175 -
Dod05g1438 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 147 266 - -
Dod05g1438 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 331 IPR039605 GO:0003680
Dod05g1438 333 MobiDBLite consensus disorder prediction 1 97 - -
Dod05g1438 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 10 331 - -
Dod05g1438 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 150 263 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1438 Dod-Chr5 38805553 38810939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1438 1 330 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 60.393 3.69e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1438 - - gmx:100801730 482.641