Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1436 ATGCTGATATCCTCATTCAGGTGCACAACAGTATCCCCACTTAGCAGCTCTGCTCTCTCATCATGCATAAAGATTCATGTTCCTAGACCTCAAATTTGCACACTGCCCTTTATTCAGAATGTTCAACAAGGCACTGAACCCTCTCTCTCTTTCCAGAAACCTCTTTACATTTCATTGTCAACGAGACCAGGAAGGAGGAGGGTTGGAGAGTGCCATGCCTATGAGGCAGATAAGTCACGGGCACTAGAGGTTAACATTGGAGAGCAGGCAGGGGTAGAGGCAGCTCAGAGGGTAAAAATTGGCTTGTATTTTGCTACATGGTGGGCTCTGAACGTGGTCTTCAACATATACAACAAGAAGGTTCTGAATGCTTTTCCTTACCCGTGGCTTACTTCCACTTTGTCCCTTGCTGCTGGCTCTCTCATCATGTTTATCTCATGGGCCACAAGGGTTGCTGAAACCCCAAAACTTAACTTGGAGTTCTGGAAGGCCTTGTTTCCTGTTGCGGTGGCTCACACAATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTTTCGTTCACTCACATCATCAAGAGCGCAGAGCCTGCTTTCAGTGTGCTGGTATCAAGGTTCTTGCTTGGAGAAGCATTCCCTATGCCGGTTTACCTGTCACTGGTGCCAATTATTGGAGGCTGTGCACTTGCTGCTGTGACAGAGCTCAATTTTAATATGATTGGGTTTATGGGTGCTATGATATCAAATTTGGCCTTTGTCTTTAGGAACATTTTCTCAAAAAAGGGGATGAAGGGAATGTCTGTTAGTGGAATGAACTATTATGCTTGCCTTTCCATACTGTCACTTCTGATTCTCACACCTTTTACCTTTGTTGTGGAGGGCCCAAAGATGTGGGCTGCTGGCTGGCAAACAGCCTTGTCTCAGATTGGTCCAAATTTTGTTTGGTGGGTAATTGCCCAGAGTGTCTTTTATCACTTGTATAATCAAGTCTCTTACATGTCTCTTGATCAGATTTCTCCCCTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCGGTAATTGTCTCTTCCATCCTTATCTTCCACACACCAATTCAGCCAATCAATGCCCTTGGGGCTGCCATTGCAATTCTCGGCACTTTCCTCTATTCACAGGCTAAACAGTGA 1176 0.4507 MLISSFRCTTVSPLSSSALSSCIKIHVPRPQICTLPFIQNVQQGTEPSLSFQKPLYISLSTRPGRRRVGECHAYEADKSRALEVNIGEQAGVEAAQRVKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMFISWATRVAETPKLNLEFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSAEPAFSVLVSRFLLGEAFPMPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFTFVVEGPKMWAAGWQTALSQIGPNFVWWVIAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPIQPINALGAAIAILGTFLYSQAKQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1436 391 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Dod05g1436 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 234 - -
Dod05g1436 391 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
Dod05g1436 391 PANTHER SOLUTE CARRIER FAMILY 35 56 390 - -
Dod05g1436 391 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 56 390 - -
Dod05g1436 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 296 388 - -
Dod05g1436 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1436 Dod-Chr5 38780352 38785555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1436 17 391 Antiporters AT1G61800 74.603 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1436 K15283 - gmx:100820126 619.002