Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1429 ATGGATCCAATTACAGCACACGGCCATTCTCTTCCCCCTCCTTTCCACACAACAAGAGATCACCATCTCCATCTTCACCAGCTCCACCCTTTGCAGCAAGCCACGGAAGACGAGCAAAGCGGAAGCAGCGGTGGCCCAAACCTCCTCCCTCACATAAGGGAACAAGAAGAAAACAACAACGACAATAACAACAATGAAGCTAAGGAAACAACAGGCTCAGGAGAACCCGAAATAACAAGAAGGCCCCGAGGGAGGCCCGCGGGATCCAAGAACAAGCTGAAGCCGCCCATCATCATCACGCGCGACAGCGCCAACGCGCTCCGCACGCACGTGATGGAGGTTGCCAACGGCTGCGACATCGTGGAGAGCGTGTCCGCCTTCGCCGAGGCGGCGCCAGAGAGGGGAAGGTTCGAGATCTTGTCCCTTGCGGGATCATTTCTCCCACCACCTGCTCCTCCGGCAGCATCTGGTTTGACCATATACTTGGTCGGAGGGCAAGGACAGGTGGTGGGAGGGAGCGTTGTTGGGACGCTGGTGGCTTCGGGGCCTGTGGTGATCATGGCTGCTTCATTCAGCAACGCTGCTTATGAGAGGCTACCTTTGGAAGAAGAGGATCCCGCCACGCTGCCACTGCAACAAGGAGAGTCTTCAATTGGTTCACCTCCGGGTGGTGCTGGTGGTGTTGGTCAGCAGCAACAGTCACAACAGCTTTTGGGGGATGCAACTGCAAATGCATCTCCTCCACTTTTCCATGGTTTGCCTCCTAATCTTCTCAATTCTATTCAAATGCCTTCTGAGGCATTCTGGGCAACTGGTCACTCTCCATTCTGA 831 0.5523 MDPITAHGHSLPPPFHTTRDHHLHLHQLHPLQQATEDEQSGSSGGPNLLPHIREQEENNNDNNNNEAKETTGSGEPEITRRPRGRPAGSKNKLKPPIIITRDSANALRTHVMEVANGCDIVESVSAFAEAAPERGRFEILSLAGSFLPPPAPPAASGLTIYLVGGQGQVVGGSVVGTLVASGPVVIMAASFSNAAYERLPLEEEDPATLPLQQGESSIGSPPGGAGGVGQQQQSQQLLGDATANASPPLFHGLPPNLLNSIQMPSEAFWATGHSPF* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1429 276 PIRSF ESCAROLA 130 276 IPR014476 GO:0003680
Dod05g1429 276 PIRSF ESCAROLA 16 132 IPR014476 GO:0003680
Dod05g1429 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 129 - -
Dod05g1429 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 134 276 - -
Dod05g1429 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 193 IPR005175 -
Dod05g1429 276 ProSiteProfiles PPC domain profile profile. 71 212 IPR005175 -
Dod05g1429 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 210 - -
Dod05g1429 276 MobiDBLite consensus disorder prediction 211 245 - -
Dod05g1429 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 129 IPR014476 GO:0003680
Dod05g1429 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 134 276 IPR014476 GO:0003680
Dod05g1429 276 MobiDBLite consensus disorder prediction 33 96 - -
Dod05g1429 276 MobiDBLite consensus disorder prediction 226 242 - -
Dod05g1429 276 Gene3D - 130 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1429 Dod-Chr5 38625192 38626107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1429 54 276 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 50.800 2.25e-56 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1429 - - gmx:100781436 289.656