Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1428 ATGGGTTCGGAGCACAACGACGACAGCACAAGCTACAAATCTTCGGAGCCGAAGCCATGCGCCAACAACTGCGGCTTCTTCGGCACCGCGGGGAACAGGAACCTCTGTTCCAAGTGCTACAGAGACTTGTGCGTTGAAGAACAGCGTGCCGCTTCCGCCAAAGCCGCCGTCGACAAGACCCTCCTCCACGGCGGTGCCGCCTCCTCCTCGTCGCCTTCTCTGGAGACCCTCGACTCCGCCGTTCCATCGGCAGCGCCCTCCTCGTCCTCCGGGCTACCGTCCGGGACGGCTGTGCCGTCGAACCGGTGCGGGATTTGTAACAAGAAGGTTGGGTTGATGGGGTTCGTGTGCAAGTGTGGGGCCACGTTCTGCGGTGTGCATCGGTACCCTGAGAAGCACGATTGTTCGTATGATTTCAAGGGTTCCGAGCGTGACGCGATTTCCAAGGCTAACCCTGTCGTGAAAGCCGACAAGGGAGGGGGCGCCCTGTCACGAGGTTTCTGTATTGGAAGAAAACGTAGTTTGTTCGAGGACAATTCATAG 543 0.5893 MGSEHNDDSTSYKSSEPKPCANNCGFFGTAGNRNLCSKCYRDLCVEEQRAASAKAAVDKTLLHGGAASSSSPSLETLDSAVPSAAPSSSSGLPSGTAVPSNRCGICNKKVGLMGFVCKCGATFCGVHRYPEKHDCSYDFKGSERDAISKANPVVKADKGGGALSRGFCIGRKRSLFEDNS* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1428 180 ProSiteProfiles Zinc finger AN1-type profile. 97 143 IPR000058 GO:0008270
Dod05g1428 180 MobiDBLite consensus disorder prediction 1 20 - -
Dod05g1428 180 Pfam AN1-like Zinc finger 103 139 IPR000058 GO:0008270
Dod05g1428 180 Pfam A20-like zinc finger 19 41 IPR002653 GO:0003677|GO:0008270
Dod05g1428 180 MobiDBLite consensus disorder prediction 64 98 - -
Dod05g1428 180 Gene3D - 3 61 - -
Dod05g1428 180 ProSiteProfiles Zinc finger A20-type profile. 14 48 IPR002653 GO:0003677|GO:0008270
Dod05g1428 180 SMART A20_3 17 41 IPR002653 GO:0003677|GO:0008270
Dod05g1428 180 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 158 - -
Dod05g1428 180 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 1 158 - -
Dod05g1428 180 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 58 - -
Dod05g1428 180 SUPERFAMILY AN1-like Zinc finger 98 157 IPR035896 -
Dod05g1428 180 Gene3D - 73 159 IPR035896 -
Dod05g1428 180 SMART AN1_Zf_4 103 140 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1428 Dod-Chr5 38615376 38617074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1428 20 158 C2H2 Transcription Factor Family AT3G52800 45.033 3.48e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1428 - - adu:107472707 228.409