Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1424 ATGGGTTTGCTTATGGTGGAACCAGCACCAGTAGCAGCAATAGAGAACTACATTGGTCAAGAAGGTTTCAAATTGCTCTTGGAACAGGCTAGAGCCCTTATCTATCTTCACCACGACTGCCATCCTCCAATTCTTCATCTCAACATTAAGTCCTCTAACATACTCTTGGATGACAAGTATGAAGCAAAGTTGTCTGATTATGGGTTAGGAAAGCTGCTTCCCATTTTGGACAATTACAGTCAGACCAAGTTCCACAATGCTGTGGGGTACGTTGCACCCGAGTTGGCTCAAAGCCTGAGTCTGACTGCGAAGTGTGATGTTTATGGTTTTGGGGTCATTCTTTTGGAGTTGGTTACTGGGAGGAAGCCTGTAGAGAGTACATCAGCAAATGAGGTGATGGTTTTGTGTGAATATGTAAGAGGGTTGTTGAAGAGTGGCTCAGCTTCAGATTGCTTGGCAACAGGCTTGGTGGGCTTTGCTGAGAACGAATTGTTTCAGATTATGAAACTCGGGCTAATTTGTACTTCAGAGGACCCTTCAAGGAGACCAAACATGGCCGAGGTTGTCCAGGTCCTTGAGTCCATCAGAAATGGACAGGGATCACATTGA 609 0.4532 MGLLMVEPAPVAAIENYIGQEGFKLLLEQARALIYLHHDCHPPILHLNIKSSNILLDDKYEAKLSDYGLGKLLPILDNYSQTKFHNAVGYVAPELAQSLSLTAKCDVYGFGVILLELVTGRKPVESTSANEVMVLCEYVRGLLKSGSASDCLATGLVGFAENELFQIMKLGLICTSEDPSRRPNMAEVVQVLESIRNGQGSH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1424 202 Pfam Protein kinase domain 25 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1424 202 Gene3D Transferase(Phosphotransferase) domain 1 17 201 - -
Dod05g1424 202 PANTHER OS05G0588300 PROTEIN 20 200 - -
Dod05g1424 202 PANTHER F16P17.10 PROTEIN 20 200 - -
Dod05g1424 202 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1424 202 SUPERFAMILY Protein kinase-like (PK-like) 24 193 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1424 Dod-Chr5 38580477 38581085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1424 23 201 Receptor kinase-like Gene Family AT1G12460 67.956 2.43e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dod05g1424 Pkinase 8.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1424 - - gmx:100805681 290.812