Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1413 ATGGATGACAGCGTGGACAGGCTGGGCCAGTCGGCGGAGGAGCTTGGGCTCACGGGCCGGGCCGTTGGGGAGGAAGACTTCGCGTGGCACATGAGCAACGTCCAGACTTGGGTGAGTGCCGCCATGACTGATCAGACCACTTGTCTTGATGGGTTTTCTGGGCCTTATTATCGAATGGATGGAAGCTTGAAAGCTGCTATAAGGGCGAGAGTTGTTGACGCTTCTCAGGTCACAAGTAATGCACTTGCTTTGGTTAATCGCTTTCGCCTCAAACCACCTTGCTGCTGCTGCTGCTTCTGCTACCCACAGTGA 312 0.5513 MDDSVDRLGQSAEELGLTGRAVGEEDFAWHMSNVQTWVSAAMTDQTTCLDGFSGPYYRMDGSLKAAIRARVVDASQVTSNALALVNRFRLKPPCCCCCFCYPQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1413 103 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 86 IPR006501 GO:0004857
Dod05g1413 103 PANTHER PECTINESTERASE INHIBITOR-LIKE 1 89 - -
Dod05g1413 103 Pfam Plant invertase/pectin methylesterase inhibitor 1 84 IPR006501 GO:0004857
Dod05g1413 103 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 88 IPR035513 -
Dod05g1413 103 CDD PMEI-like_3 1 88 - -
Dod05g1413 103 PANTHER PECTINESTERASE INHIBITOR 9 1 89 - -
Dod05g1413 103 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 89 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1413 Dod-Chr5 38478658 38478969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1413 10 85 Carbohydrate Esterase AT4G33230 32.911 8.36e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1413 - - gmx:100789460 127.487