Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1406 ATGGACACCTTTTCCCATGTACCTCCAGGCTTTCGGTTTCATCCAACTGATGAAGAACTTGTTGATTACTACCTGAGAAAAAAGGTAGCGTCTAAAAAGAGTGATATACATTTCATCAAAGATGTTGACCTCTATAAAATTGAGCCATGGGATCTTCAAGAATTATGCAAAATAGGAACTGATGAACAAAATGACTGGTATTTCTTTAGTCATAAAGATAAGAAGTACCCAACTGGAACTCGCACCAATAGAGCTACTAAAGCAGGATTCTGGAAAGCCACGGGAAGGGATAAAGCAATATACTCTAAGCATTGCCTGATTGGTATGAGAAAGACCCTTGTGTTTTACAAAGGAAGAGCTCCAAATGGACTGAAGTCTGATTGGATTATGCATGAATATCGACTTGAAACTAATGAAAATGGAACACCTTCGGAAGAAGGCTGGGTTGTATGCAGAGTGTTCAAGAAGCGGATAACAGCAATGAGGAAAGTGGGGGAGTATGAGTCACCCTGTTGGTATGATGACCAAGTTCTCTTCATGCAAGACGTTGAATCCCCAAGGAGAATTTCACACCCTTATGCATCATACCACCACCACCACCAACCCTGCAAGCCAGAGCTGGAACTTCAATACAACATGCCCCATGATGCTTTCCTCCAACTTCCACAGCTAGAAAGCCCCAAGGTTCCTCAATCAGCAGACAGCTCAATTGTCCCTTATGGCTATAATGACAACAACAACAACAATGGAAGCACCTTGCAGTTCTCATCACTCATTCAAGAAGAACAGGTGCAACAACATTGCCACCAACAAAATGTGCAACTGCAATCCATTTATGGTGGCAATGATCGAGCATTGGACCAAGTTACGGATTGGAGAATACTTGACAAATTTGTTGCTTCTCAGCTAAGTCATGACCAAGATGTTTCCAATGAAACCAGTTATAATTCCAATGCATCTGTCCTCCATGTGGCTGAAGAACAGATTACTATGCTGGCGAACGGATCCAGCAAGAGGCCTCAAATTTCCCAGGAATATGCTTCAACATCCACATCCAGTAGCCAGATTGAACTGTGGAACTGA 1083 0.4247 MDTFSHVPPGFRFHPTDEELVDYYLRKKVASKKSDIHFIKDVDLYKIEPWDLQELCKIGTDEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGLKSDWIMHEYRLETNENGTPSEEGWVVCRVFKKRITAMRKVGEYESPCWYDDQVLFMQDVESPRRISHPYASYHHHHQPCKPELELQYNMPHDAFLQLPQLESPKVPQSADSSIVPYGYNDNNNNNGSTLQFSSLIQEEQVQQHCHQQNVQLQSIYGGNDRALDQVTDWRILDKFVASQLSHDQDVSNETSYNSNASVLHVAEEQITMLANGSSKRPQISQEYASTSTSSSQIELWN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1406 360 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Dod05g1406 360 MobiDBLite consensus disorder prediction 333 360 - -
Dod05g1406 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 346 - -
Dod05g1406 360 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Dod05g1406 360 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Dod05g1406 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 346 - -
Dod05g1406 360 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1406 Dod-Chr5 38393362 38399123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1406 1 359 NAC Transcription Factor Family AT1G12260 54.922 2.01e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod05g1406 NAM 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1406 - - gmx:100783529 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1406 05 38393362 38399123 Dod05g1406 05 38393362 38399123 ECH
Dod02g1590 02 19551242 19553560 Dod05g1406 05 38393362 38399123 PCT