Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1399 ATGTCGGCTAACAGAGACGAGGATCCCCGCATTCATGGCATCAAAACTAAGATTCGTGTTGTCCCTGATTTCCCTAAACCTGGTATTATGTTCCAAGACATCACTACACTATTGCTGGATCCCAAAGCCTTCAAGGACACTATAGATTTGTTCGTTGAGAGATACAAAGGCAAAAATATCTCTGTCGTTGCAGGAATTGAAGCTCGGGGATTTATTTTTGGTCCTTCCATTGCCCTGGCAATAGGAGCAAAGTTTGTACCATTGAGGAAACCAAAAAAGTTGCCAGGAAAAGTTATTTCTCAAGAGTATATTTTGGAATACGGAAGGGACTGTCTTGAGATGCATGTTGGAGCCGTGGAACCTGGTGAGCGTGCTCTAGTTGTTGATGATTTGATTGCTACCGGTGGAACACTCTGTGCGGCCATGGACTTACTAGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCATGCGTTATTGAATTACCAGAATTAAAGGGTCGTGAACGGTTGAATGGGAAGCCCTTGTATGTGTTAGTGGAATATTTTGAGTGCTGTGAGTAG 561 0.4421 MSANRDEDPRIHGIKTKIRVVPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPSIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEPGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYFECCE* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1399 186 CDD PRTases_typeI 48 180 IPR000836 -
Dod05g1399 186 SUPERFAMILY PRTase-like 12 175 IPR029057 -
Dod05g1399 186 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Dod05g1399 186 TIGRFAM apt: adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Dod05g1399 186 Gene3D - 2 181 IPR029057 -
Dod05g1399 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 180 - -
Dod05g1399 186 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Dod05g1399 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1399 Dod-Chr5 38240081 38246855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1399 1 180 PRT Gene Family AT1G27450 76.111 2.59e-98 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1399 K00759 - gmx:100790431 355.14