Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1375 ATGGCTTCCCTGTTCCCCAAAACCCTAATTGCAACTCGCTTACTTCATCGAACCCACCCTTCACCATTTCGCTCTCCCGCTTCTCAACCAATTACCGCCACCCGACCCATGAGCTCCGGTCGCGTCTTCCAGCTCAAGCTCGACCCTCTAACCGGCAACTCCGAATGGGTCGTAATCCAAGAAGAAGACCAAAACGACGACGAACCAAGTTTCAATCACCAACCCCTCCTCGCGACGACGTCGTATTTGGACATGCTCAACGACACCCCCAGAAACACAGCATTCCGACAAGCCATTGAGAAAACCGTCACAAAACCTTGCCACGTTCTCGATATCGGTGCTGGAACTGGGTTGCTGTCCATGATGGCTTCACGAGCTATGGGTGATGAAGGGACGGTGACGGCGTGCGAGTCTTACCTTCCGATGGTGAAGTTGATGAAGAAGGTTCTTCGCGCTAACGGGATGGAAGGAAGAATTAGAGTAATCAATAAGCGCTCTGATGAACTCCAAGTCGGTGTTGATGTGCCTTCACGTGCAGATGTACTTGTAAGTGAGATACTAGATTCGGAATTGCTGGGTGAGGGGCTTATACCGACCCTGCAACATGCACATGACAATTTGTTGGTGGAAAGCCCTCTAACTGTGCCATATCGAGCAACTACATATGGACAGCTAGTGGAAAGCCCATTCTTACAGCAGCTGCATGATTTGCATAACAATGAAGCTAGTGCATCTGATGGTATCCGTCTTACCCCTCCAGGACTCGATAATGTTTTAAGTGTCAAACATCAGCAATATGCCATGCATTGTGGTCTGTTAGAAAAGGAAATAAAGCTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGCTGTGCATAAAGGCAACAACTGATGGTAGACTTCATGCTGTGGTCTCATGGTGGGTACTTCAACTTGATCATGAAGGAACAATATATTATTCCACTGCTCCTAGGTGGACTAGCTCAAAAACCATTAAAAGTCCTGTTGATTGGTGTGACCATTGGAAACAGTGTGTTTGGTTTGTTCCTGGCAGTGGTATAACCTTATGCAAAGGGGAAGAAATTCATTTACATGCCACTCATACTGATACTACTATCGCTTATAGTTTTGATACTAAAGTGCCAACAACTGAGGTTTCGCGAGATGGGCTTACAGCTGGAGATTTGAAGCTTGTACTGTTGCCCGAAAGGGCTGCAATCTATGGAGACAAAAGATGGAGGCTTTCGATGTGTAAAGCTGTAGAAAGTGTGTTGCAGGGAAAAGATCGTCCATTATGCTTGGTTCCGGATGATAGTTTTTTTTTACCTCTCCTTCTGGCACATTTTTCAGAAGCATCGCATGTAATTTCATTACTTCCTGGGCTGAAGGAAAGGGGCCTCCAATATTTGCAAGCTGTTGCTCACGCAAATCATTTATCACCTAATTGCATAGAAGTTCTTGAAAAGAGGGTGAAACAGTTAACCATAAATGATACACATGGAAGAAAGGTTGATCTGTTAGTAGCAGAACCTTTCTATCTTGGACTCAATGGCATGCTTCCATGGCAGAACCTGCGGTTTTGGAAAGATCGGACTATGCTTGATTCTATCCTCTCTGAAGATGCTTTGGTTATTCCTAGCAAAGGAATATTGAGGGCTTGCGCCATCTCTCTTCCTGATCTTTGGAAAAGCCGGTGCTGCTTGGATAAGATAGAAGGTTTTGACCATTCAGTGGTAAATGCCACATTGGGGGCTTGCGGTCGTCTGCCTGAATTGGAAGAGGGTCCTTGTCTTCCTTACTTCATCTGGCAGTGTGGAGAATTTGATGTCCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTCTCGAAACAAATATGCCAATGTCAAGGAAGATCACAGGTTAAATTCACCAAGACGGGGGTATGCCATGGGTTTGCACTTTGGGTCGACTGGGTGATGGATCCGCAAAATTCTATTGTGATATCTACTGGTCCAGATAAGAGATATTGGAAGCAGGGAGTAAAGCTTCTTGGAACACCAAGAACAGTAGGAGCCCAAGGATCGGAGAATGTCGAAGCATGTTGTTGCTCTGCAGTTCTTGAAGCATCTTTTAATCCATCAGACGGGCACCTCAAAGTTTCACTTGATTTCTTATGA 2196 0.4508 MASLFPKTLIATRLLHRTHPSPFRSPASQPITATRPMSSGRVFQLKLDPLTGNSEWVVIQEEDQNDDEPSFNHQPLLATTSYLDMLNDTPRNTAFRQAIEKTVTKPCHVLDIGAGTGLLSMMASRAMGDEGTVTACESYLPMVKLMKKVLRANGMEGRIRVINKRSDELQVGVDVPSRADVLVSEILDSELLGEGLIPTLQHAHDNLLVESPLTVPYRATTYGQLVESPFLQQLHDLHNNEASASDGIRLTPPGLDNVLSVKHQQYAMHCGLLEKEIKLLSEPFKIFEFDFWKRPESYGETELCIKATTDGRLHAVVSWWVLQLDHEGTIYYSTAPRWTSSKTIKSPVDWCDHWKQCVWFVPGSGITLCKGEEIHLHATHTDTTIAYSFDTKVPTTEVSRDGLTAGDLKLVLLPERAAIYGDKRWRLSMCKAVESVLQGKDRPLCLVPDDSFFLPLLLAHFSEASHVISLLPGLKERGLQYLQAVAHANHLSPNCIEVLEKRVKQLTINDTHGRKVDLLVAEPFYLGLNGMLPWQNLRFWKDRTMLDSILSEDALVIPSKGILRACAISLPDLWKSRCCLDKIEGFDHSVVNATLGACGRLPELEEGPCLPYFIWQCGEFDVLSETFDVMEFDFSKQICQCQGRSQVKFTKTGVCHGFALWVDWVMDPQNSIVISTGPDKRYWKQGVKLLGTPRTVGAQGSENVEACCCSAVLEASFNPSDGHLKVSLDFL* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1375 731 Gene3D - 218 401 - -
Dod05g1375 731 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 479 706 IPR029063 -
Dod05g1375 731 Gene3D Vaccinia Virus protein VP39 410 558 IPR029063 -
Dod05g1375 731 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 43 670 IPR025799 GO:0016274|GO:0018216
Dod05g1375 731 Pfam Ribosomal protein L11 methyltransferase (PrmA) 97 189 - -
Dod05g1375 731 PIRSF Arg_N-mtase 40 727 IPR014644 GO:0006479|GO:0008168
Dod05g1375 731 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 66 390 IPR025799 GO:0016274|GO:0018216
Dod05g1375 731 Gene3D - 562 730 - -
Dod05g1375 731 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 43 670 - -
Dod05g1375 731 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 396 731 IPR025799 GO:0016274|GO:0018216
Dod05g1375 731 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 383 IPR029063 -
Dod05g1375 731 Gene3D Vaccinia Virus protein VP39 75 217 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1375 Dod-Chr5 37858004 37863134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1375 84 222 C2H2 Transcription Factor Family AT3G12270 31.081 1.36e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1375 K11438 - gmx:100785846 1207.59