Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1369 ATGGCTCATTTCTTCATCCCTCTGCTAATACTTTTTGTTTTCACTTGCATATTGCATGCAGCAACCGTGACGTGCACAAGCTACCACGACGACACTACAACCAAAATAGTAGTCTCTTCCAGAAACTCGTCCAATAAGCACAATCTCCGTTGGGTTGGACCCATCGGTCACCGCGTGATCACCGTTGATGTCAATGGCGGTGGCCATTTCCGGTCAGTCCAATCCGCCGTTGATGCTGTCCCAGAAAACAACAGAATGAACGTCCTCATTCAAATTAGCGCCGGATACTACATAGAGAAGGTGGTGGTGCCGGCGACGAAGCCGTACATAACGTTTCAGGGGGAAGGGAGGGATTTGACGGTGATAGAATGGCATGATCGGGCCAGTGACCCGGGCCCCAGCGGACAACAGCTGCGTACTTACAGAACTGCCTCTGTCGCGGTTTTTGCCAACTACTTCTCTGCTAGGAATATCAGCTTCAAGAATACAGCACCAGCACCAATGCCGGGGATGCAGGGATGGCAAGCGGCGGCGTTTCGCATATCAGGGGACAAAGCATACTTCTCCGGCTGTGGCTTCTACGGTGCCCAGGACACTCTTTGCGACGACGCTGGCCGCCATTATTTCAAGGAATGCTTCATCCAGGGCTCCATAGATTTCATTTTTGGGAATGGCAGGTCCATGTACAAGGATTGCGAGCTGCACTCAATAGCAACAAGGTTCGGGTCAATAGCAGCCCAAGACAGGCAACACCCATATGAGAAGACGGGCTTTGCATTTGTTCGTTGCAAGGTGACGGGCTCAGGCCCAATTTATGTGGGCCGTGCAATGGGCAAGTACTCTAGGATTGTCTATGCCTATACATACTTCGCCGACATAGTTGCACATGGTGGTTGGGATTATTGGAACAATGCAGACAACAAGAACAAGACTGTGTTCTTTGGGGTGTACAAGTGTTGGGGCCCAGGAGCAGCGGCGATACGTGGGGCCTCATTGGCCCAAGAGCTGGATTTCGAAGACGCCCATCCATTCCTGGTCAAGAGTTTTGTCAATGGGAGACACTGGATCGCACCCTCTGATGCTTAG 1086 0.5157 MAHFFIPLLILFVFTCILHAATVTCTSYHDDTTTKIVVSSRNSSNKHNLRWVGPIGHRVITVDVNGGGHFRSVQSAVDAVPENNRMNVLIQISAGYYIEKVVVPATKPYITFQGEGRDLTVIEWHDRASDPGPSGQQLRTYRTASVAVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECFIQGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRQHPYEKTGFAFVRCKVTGSGPIYVGRAMGKYSRIVYAYTYFADIVAHGGWDYWNNADNKNKTVFFGVYKCWGPGAAAIRGASLAQELDFEDAHPFLVKSFVNGRHWIAPSDA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1369 361 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 360 - -
Dod05g1369 361 SUPERFAMILY Pectin lyase-like 57 358 IPR011050 -
Dod05g1369 361 Pfam Pectinesterase 60 352 IPR000070 GO:0030599|GO:0042545
Dod05g1369 361 ProSitePatterns Pectinesterase signature 2. 214 223 IPR033131 -
Dod05g1369 361 Gene3D - 56 360 IPR012334 -
Dod05g1369 361 PANTHER PECTINESTERASE 68-RELATED 20 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1369 Dod-Chr5 37775662 37780883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1369 4 361 Carbohydrate Esterase AT5G47500 69.167 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1369 - - gmx:100796327 624.78