Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1363 ATGGAGAGGCACAAATGCAAGCTTTGCACAAGAACCTTCGCCAATGGCAGAGCCCTCGGCGGCCACATGAAGGCCCACTTAGCCACCTTGCCCCTCCCTCCAAAGCCTCAACCATTCCAAGCTGATGAATCCTTTTCCTTCTCATACTCATCCTCACAATCACAACAACAACAACAACAACAAGAAGCAGAACAACAAGTACTAACACACAGTCCCAGTCAGAGTCTCAGAGAATCAGAAGAAAAGGGTGTGATATACGGGTTGAGGGGAAATCCCAAGAAGAGTTTCAGGGTCGCAGATCCTGGGTTCTCTTTTGCATCACCACCACCTGACACTGCTGGTTCTGACGATGTTGTTATTGTTCAGGACAGAGAGAGCGAGACCGAGTCAAATAAGAACCCTACTCGTCAACGAAGATCCAAGCGTAACCGAAACCGAAACTCCACTGTCTTACCGACTCCGAACCTGCAGAAGAAGCCGAAGCTGAGCTTCGTTGCGGAACCACCCGCCGAGCCAGAACCTGTTGTTAGCTCCGTCTCCGACGCCTCAAAAGAAGAAGACGTCGCCATGTGCCTCATGATGCTCTCCAGGGACACGTGGAAGAAGAAGAACAACAACAATGCAGGGAAACAAGATCAACAAAGAGAACAACACCAAGAACTAGAACAAGAAGAACAAAAGGAAGTTGTTGATGGGTTCAAGGTGGAGAGGGTTAGGGGGAAGAAGCATCATCACGAGTGTGAACGATGCGGGAAAACGTTTCGATCTTCGAGGGCATTGGGGAGCCACAGGAGCATATGCTGTCGTGGCGAATCAGGTGGTGGTGAGAGGGTTTTCGAGTGTCCGTTTTGTTCGAAGGTGTTTGGGTCTGGTCAAGCACTTGGTGGACACAAGAGATCTCACCTCATGGGCATTAATGCTGCAACTTCGTCTTCAACTGCGAATAATGATTCTGTTGCGTTGTTGAAGTCCAGAGAGAGCTTCATAGATCTCAACTTGCCAGCTCCCGTAGAAGAAGAAAAAGAAGATGATGATGATGATGA 1043 0.4899 MERHKCKLCTRTFANGRALGGHMKAHLATLPLPPKPQPFQADESFSFSYSSSQSQQQQQQQEAEQQVLTHSPSQSLRESEEKGVIYGLRGNPKKSFRVADPGFSFASPPPDTAGSDDVVIVQDRESETESNKNPTRQRRSKRNRNRNSTVLPTPNLQKKPKLSFVAEPPAEPEPVVSSVSDASKEEDVAMCLMMLSRDTWKKKNNNNAGKQDQQREQHQELEQEEQKEVVDGFKVERVRGKKHHHECERCGKTFRSSRALGSHRSICCRGESGGGERVFECPFCSKVFGSGQALGGHKRSHLMGINAATSSSTANNDSVALLKSRESFIDLNLPAPVEEEKEDDDDD 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1363 347 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 341 IPR044303 GO:0006355
Dod05g1363 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 245 273 IPR013087 -
Dod05g1363 347 SMART c2h2final6 4 26 IPR013087 -
Dod05g1363 347 SMART c2h2final6 279 301 IPR013087 -
Dod05g1363 347 SMART c2h2final6 245 265 IPR013087 -
Dod05g1363 347 MobiDBLite consensus disorder prediction 123 161 - -
Dod05g1363 347 SUPERFAMILY beta-beta-alpha zinc fingers 244 301 IPR036236 -
Dod05g1363 347 Coils Coil 204 227 - -
Dod05g1363 347 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Dod05g1363 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 279 301 IPR013087 -
Dod05g1363 347 Pfam C2H2-type zinc finger 278 301 - -
Dod05g1363 347 Pfam C2H2-type zinc finger 3 28 - -
Dod05g1363 347 Pfam C2H2-type zinc finger 244 264 - -
Dod05g1363 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Dod05g1363 347 Gene3D Classic Zinc Finger 239 314 - -
Dod05g1363 347 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 341 - -
Dod05g1363 347 ProSitePatterns Zinc finger C2H2 type domain signature. 281 301 IPR013087 -
Dod05g1363 347 MobiDBLite consensus disorder prediction 203 228 - -
Dod05g1363 347 MobiDBLite consensus disorder prediction 31 80 - -
Dod05g1363 347 MobiDBLite consensus disorder prediction 200 228 - -
Dod05g1363 347 MobiDBLite consensus disorder prediction 41 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1363 Dod-Chr5 37699746 37700916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1363 1 340 C2H2 Transcription Factor Family AT3G60580 33.425 8.86e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod05g1363 zf-C2H2_6 2.1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1363 - - jre:108989911 303.138