Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1335 ATGATGTACGGACATAGCACGTACGAATCCGACATGGCCCTCTTGGACTCAATTCGCCGGCACTTGTTGGGAGAGTCCGAACCCAAATTCGGAGCTCCGAATAACAATAATGTTTCGGGCAAAGCCCATACCTATTCTCGGAGCTCCAGTTTCAGCAGCTTGTACCCGTGCCTGAGCGACACGTGGGGTGAACTTCCCTTAAAAGAGGACGATTCCGAGGACATGTTGCTCTACGGCGTGCTGCACGACGCCGTTAACGTCGGGTGGGTCCCGGCGTTAGAAACCGGGTCGCCCGAATCCGATAATTCGGGTTTCGTAACAGTGAAGCCCGAGCCGGACTTGCCGCCGCTGCAGCAGCCTACGGCGGTGGAGAAGGCGGCTCCGGCGAAGGGGAAGCACTACCGCGGCGTGAGGAAGCGGCCGTGGGGGACGTTCGCGGCGGAGATAAGGGACCCGGCGAAGAACGGCGCCCGCGTGTGGCTTGGGACGTTCGAGACCGCGGAGGATGCAGCGCTGGCGTACGATAGGGCGGCGTACCGTATGAGGGGTTCCCGGGCGCTGTTGAATTTTCCGCTGAGGATCAATTCTGGGGAACCAGACCCCGTTAGGGTCACGTCGAAGCGGTCATCGCCGGAGAGGAGTTCTTCGTCGGAGGAGAGTGGGTCGCCGGCGGCAAAGCGGAAGAAGAAGGCGCTGGCGGCGGCGGAGGCTGAACAAGTGGGGGGTCAAGTGGCCAGGTGA 741 0.614 MMYGHSTYESDMALLDSIRRHLLGESEPKFGAPNNNNVSGKAHTYSRSSSFSSLYPCLSDTWGELPLKEDDSEDMLLYGVLHDAVNVGWVPALETGSPESDNSGFVTVKPEPDLPPLQQPTAVEKAAPAKGKHYRGVRKRPWGTFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPDPVRVTSKRSSPERSSSSEESGSPAAKRKKKALAAAEAEQVGGQVAR* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1335 246 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Dod05g1335 246 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Dod05g1335 246 Pfam AP2 domain 133 183 IPR001471 GO:0003700|GO:0006355
Dod05g1335 246 CDD AP2 132 191 IPR001471 GO:0003700|GO:0006355
Dod05g1335 246 PANTHER BNAANNG21280D PROTEIN 30 243 - -
Dod05g1335 246 Gene3D AP2/ERF domain 132 194 IPR036955 GO:0003700|GO:0006355
Dod05g1335 246 MobiDBLite consensus disorder prediction 194 246 - -
Dod05g1335 246 SUPERFAMILY DNA-binding domain 133 193 IPR016177 GO:0003677
Dod05g1335 246 ProSiteProfiles AP2/ERF domain profile. 133 191 IPR001471 GO:0003700|GO:0006355
Dod05g1335 246 PANTHER DNA-BINDING DOMAIN 30 243 IPR044808 GO:0003700|GO:0009873
Dod05g1335 246 SMART rav1_2 133 197 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1335 Dod-Chr5 37150524 37151864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1335 9 234 AP2-EREBP Transcription Factor Family AT4G17500 57.317 2.01e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod05g1335 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1335 K09286 - gmx:100819649 296.204