Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1318 ATGGAACTTAAGCATCGACTTGGCCTTGTTTCCGTCATACTGCTCTTGCCTGCACTCTGTAGCCCCATGGATCCATTTACGATCTCACGAGCAACCTATTATAGTACCTCTGATGGTTATGGGAATCCAAAGGGAGCTTGTGGCTACGGCGACTATGGAAGGACGGTCCAAGGTGGCAGTGTCGCAGCCGTATCTGGGCTATGGAAGGGTGGAAGTGGCTGTGGTGCATGCTATCAGTTAATTTTCTTTCCCTTCATTCTAATAGCCGCATTGTGCGATGATAATGGAGCAATCGTGATGGTGACTGACTTTGGTGCGGGAGACAGAACAGACTTCATTATGAGCCCACGTTCCTTCTTAAGTTTGGGACGAAACCCAGTTGCCTCTGCAAAACTGAGGAAATACGGTGTAGTTGATATTGCATACAAAAGGGTACCTTGTAAATACCTTGGCCGCAACATCGTGTTTAAGGTCCAAGAAAGCAGCAAAAACCCTGGTTACTTTGCTGTCTTGCTTCTCAATGTTGGTGGAGCATACGATGTCACTGCTGTTGAGTTGTATCAGAAAGAAAGCAAACAATGGAGTCCATTGCGCAGGGTTTATGGGGCTGTGTTTGACTTTGCTAACCCACCAAAGGGTGAAATCCCCTTGAGGTTCCAAGTGAATGGCAATTCTGGACATAAATGGGTGCAGCCCAAAAAGCCCATCCCTAGTTATTGGAAGGCTGGAGCGACTTATGACACTGGGGTTCAACTCTAA 759 0.4717 MELKHRLGLVSVILLLPALCSPMDPFTISRATYYSTSDGYGNPKGACGYGDYGRTVQGGSVAAVSGLWKGGSGCGACYQLIFFPFILIAALCDDNGAIVMVTDFGAGDRTDFIMSPRSFLSLGRNPVASAKLRKYGVVDIAYKRVPCKYLGRNIVFKVQESSKNPGYFAVLLLNVGGAYDVTAVELYQKESKQWSPLRRVYGAVFDFANPPKGEIPLRFQVNGNSGHKWVQPKKPIPSYWKAGATYDTGVQL* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1318 252 SUPERFAMILY Barwin-like endoglucanases 13 151 IPR036908 -
Dod05g1318 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 152 IPR007112 -
Dod05g1318 252 PANTHER EXPANSIN-B3 3 252 - -
Dod05g1318 252 SUPERFAMILY PHL pollen allergen 152 247 IPR036749 -
Dod05g1318 252 Pfam Expansin C-terminal domain 154 236 IPR007117 -
Dod05g1318 252 PRINTS Expansin/Lol pI family signature 135 151 IPR007118 GO:0005576
Dod05g1318 252 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Dod05g1318 252 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Dod05g1318 252 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Dod05g1318 252 PANTHER EXPANSIN-B1-LIKE PROTEIN 3 252 - -
Dod05g1318 252 Gene3D - 149 252 IPR036749 -
Dod05g1318 252 Gene3D - 20 148 IPR036908 -
Dod05g1318 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 248 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1318 Dod-Chr5 36881700 36883489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1318 1 252 Expansin Gene Family AT4G17030 47.451 2.22e-80 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1318 - - gmx:100779487 339.732