Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1315 ATGCTGCAAAGGCTGCTACTTGGAAGAGCAAGTATTTCTTTTGTAGAAGAGTTTCAGCCTGTCAGGGACTTTCCCCCTTTATGTGGAAAAATTGCTTCTTGTCTTGGTGAAGGTGAATCTCTAAAGGGGATCTATACTTTGAAGAAACAGGTGGAAAAGACTGTTGAAGATATATATGCTTATGATGGAATGCTGCTGGATAAAGCTCAGGGTGATTCTGAAGGGAACATTGTGGAAAAAGAGAAGCCAGATATGTTTGGAAAATGCTTTACAATTCCAGAAGAAAGCTACCATCATGAGGGTGAAATGAATTCAAAGACAGAAGATGAGGGAAATGGAGATGCTGCACAGTTTGCTGGGACTTCAGGACAAGAGATTATAGTTTACCAAGAAGTCCAAGATCTTGGGACAAAACCTTTGGATATGTTTGATTCCCGGCATGAGTTGAAAGATGGACTGCAGGTTGCGCCGCGCAGGACAGTGGTGCTTGGTTTGATGTCTGAATCTGGATGCCCTTGGAGGAGTGGTGGCAAAAGAAAGGGAAAGAGAGTTTATTTTCGTTCAAATGCTGATATCAATACTAAAGACTCCAAGAAGCCTTCACAAAAGAAAAAGGGAAATGCTGCTTCTGAATCAGCGGGGGAATTGATCATTAGGGAAAAGAAGGATTCTCTTTACCCCAACGATTCAAATGTGACCCGAAATAAGGTGAGGGAAACATTACGCCTTTTTCAAATTGTCTCTAGAAAGCTTTTACGCGATGAAGAATCAAAGCTAAAAGAGCAAGCAAGTAGCAGTAGGAGGATTGATTTACAAGCAGCAAAGATCCTTGAGAAGAATGGGAAATATCTCAACACAAGTAAGATCTTGGGACCTGTCCCTGGGGTTGATGTTGGAGATGAATTTCAGTATAGAGTAGAGCTTAATGTAGTTGGCCTTCATCAGCAGATTCAGGGTGACATAGATTATGTGAAGCACAATGGCAAGATCCTTGCAACTAGTGTTGTTGTGTTGAGGGGTTATGCTGATGAGTTAGCTGATTCAGATGTCTTGATATATACAGGGTCAGGTGGAAATGTGATGAATACTGATAAAGAACTTGAAGATCAGAAGCTTGAGCAGGAAAATCTCGCTTTGAAGAACAGCATTGAGGAAAAGAATCCTGTTAGGGTGATACGGTGCTGTGAATCGATGGATGGGAAGTGTCAGACATATATCTATGATGGACAATATGTAGTTGAGACTTGCTGGCAGGTAATGGAGCCACATGGTAAGTTAGTTTTAAGGTTTCGACTGAGAAGAATCCCAGATCAACCAGAACTTTCTTGGAATGAAGTAAAGAAATCTAAACAATTCAAAACAAGGGATGGTCTATGCGTTGATGACATCTCTCATGGGAAAGAGCAAATTCCAGTATGTGCTGTGAACACCATAGATGATCAAACAAACCCACCTTTTGAATATGTAACTAGCATGATATATCCTAATTGGTGCAATCCCATTCCTCCAGGTGGATGTGATTGTGCTAATGAATGCTCCAGCTCAAAGAAATGTTCTTGTGCAGTCAAAAACGGGGGAGTGATCCCATTCAATCATGATGGGGCCATTGTAGAAGTGAAGCCTCTGGTCTATGAGTGTGGACCTTCTTGCAAGTGCCCTCCAACATGCTACAACAGAGTCAGCCAACATGGCATAAAGTTTCAACTTGAAATTTTTAAGACCAAGTCAAGAGGGTGGGGTGTGAGATCCCTGAATTCCATGCCTTCAGGAAGTTTCATTTGTGAATATGTAGGAGAGCTTCTTGGAGAGGATGAAGCTGAAGAAAGAGTCGGCAATGATGAGTATCTTTTCGATATTGGGAATAACTACAGCAATCATTCTCTTTGGGATGGACTCTCAACGGTTATGCCCGATGATGATCCGGCGACTTCTTGTGTAGTCGTGGAGGATAGCGGCTTCACCATTGATGCTGCTCACTATGGTAATGTGGGGAGATTCATCAACCATAGTTGCTCCCCAAATCTTTATGCACAAAATGTCCTCTATGATCATGATGACAAGAGGATCCCTCACATAATGCTTTTTGCTGTTGAGAACATTCCGCCCTTGCAAGAGCTGACCTACAATTACAATTATAAGATAGATCAAGTCTTTGATTCTGATGGCAATATTAAAAAGAAGAATTGCTATTGTGGTTCTGTGGAATGCACTGGTAGGATGTATTGA 2226 0.4164 MLQRLLLGRASISFVEEFQPVRDFPPLCGKIASCLGEGESLKGIYTLKKQVEKTVEDIYAYDGMLLDKAQGDSEGNIVEKEKPDMFGKCFTIPEESYHHEGEMNSKTEDEGNGDAAQFAGTSGQEIIVYQEVQDLGTKPLDMFDSRHELKDGLQVAPRRTVVLGLMSESGCPWRSGGKRKGKRVYFRSNADINTKDSKKPSQKKKGNAASESAGELIIREKKDSLYPNDSNVTRNKVRETLRLFQIVSRKLLRDEESKLKEQASSSRRIDLQAAKILEKNGKYLNTSKILGPVPGVDVGDEFQYRVELNVVGLHQQIQGDIDYVKHNGKILATSVVVLRGYADELADSDVLIYTGSGGNVMNTDKELEDQKLEQENLALKNSIEEKNPVRVIRCCESMDGKCQTYIYDGQYVVETCWQVMEPHGKLVLRFRLRRIPDQPELSWNEVKKSKQFKTRDGLCVDDISHGKEQIPVCAVNTIDDQTNPPFEYVTSMIYPNWCNPIPPGGCDCANECSSSKKCSCAVKNGGVIPFNHDGAIVEVKPLVYECGPSCKCPPTCYNRVSQHGIKFQLEIFKTKSRGWGVRSLNSMPSGSFICEYVGELLGEDEAEERVGNDEYLFDIGNNYSNHSLWDGLSTVMPDDDPATSCVVVEDSGFTIDAAHYGNVGRFINHSCSPNLYAQNVLYDHDDKRIPHIMLFAVENIPPLQELTYNYNYKIDQVFDSDGNIKKKNCYCGSVECTGRMY* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1315 741 SUPERFAMILY PUA domain-like 273 448 IPR015947 -
Dod05g1315 741 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 233 740 - -
Dod05g1315 741 SMART set_7 567 717 IPR001214 GO:0005515
Dod05g1315 741 ProSiteProfiles YDG domain profile. 291 434 IPR003105 -
Dod05g1315 741 ProSiteProfiles Pre-SET domain profile. 504 564 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod05g1315 741 Gene3D SET domain 455 741 IPR046341 -
Dod05g1315 741 Pfam SET domain 578 711 IPR001214 GO:0005515
Dod05g1315 741 Pfam Pre-SET motif 463 559 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod05g1315 741 Pfam SAD/SRA domain 290 438 IPR003105 -
Dod05g1315 741 SMART G9a_1 286 438 IPR003105 -
Dod05g1315 741 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 153 741 IPR025794 GO:0016571
Dod05g1315 741 SMART preset_2 460 551 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod05g1315 741 Gene3D - 273 454 IPR036987 -
Dod05g1315 741 MobiDBLite consensus disorder prediction 173 213 - -
Dod05g1315 741 SUPERFAMILY SET domain 453 718 IPR046341 -
Dod05g1315 741 ProSiteProfiles Post-SET domain profile. 725 741 IPR003616 -
Dod05g1315 741 ProSiteProfiles SET domain profile. 567 711 IPR001214 GO:0005515
Dod05g1315 741 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 233 740 - -
Dod05g1315 741 SMART PostSET_3 725 741 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1315 Dod-Chr5 36853745 36855970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1315 231 738 Su(var)3-9 homologs AT5G04940 37.977 5.72e-107 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod05g1315 SAD_SRA 3.4e-44 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1315 K11420 - adu:107484449 874.389