Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1314 ATGGAGCTTAGTTTGAAATATCAGCTTGGCCTTGTTTGTGTCATACTACTCTTACCTGTACTGTGTAACTCGCAGGACTCTTTCACCGATTCCAGAGCAACCTATTATGGAAGCCCTGATTGCTATGGGAATCCAAGGGGAGCTTGTGGGTTTGGGGAATATGGAAGGACGGTCAATGATGGCAGTGTCGCAGGCGTGTCTAAGCTGTGGAGGAACGGAAGTGGATGTGGTGCATGCTATCAGGTAAGGTGCAAAATACCACAATACTGCGATGAAGACGGAGCATACGTGGTGGCCACAGACTACGGTGAAGGAGACAGAACAGACTTCGTCATGAGCCCACGTGGCTACTCAGGATTGGGACGTAATGAAGATGCATCCGCAGAGTTGTTCAAATACGGTGTAGTGGATGTTGAGTACAGAAGGGTCCCTTGTAGATATGACTATAACATAGCGTTTAAGGTCCATGAACACAGCAAACGCCCAGAATACTTTGCTGTTGCGATTCTCTTTGTAGGTGGAACATACGATGTCAATGCTGCTCAGATATGGCAGGAGGACTGCCAAGAATGGAGGGGCATGCGGAGGGCTTTTGGGGGAGTGTTTGACTATGCCAACCCACCAAGTGGTGAACTCACTTTGAGGGTTCAAGTGAGTGGCAGTGCAGGGGTTTATTGGGTGCAACCAAAGAATGCTATTCCTAGTGATTGGACTGCCGGAGCTACCTATGACTCTGAGGTTCAGCTTACTTAA 753 0.4847 MELSLKYQLGLVCVILLLPVLCNSQDSFTDSRATYYGSPDCYGNPRGACGFGEYGRTVNDGSVAGVSKLWRNGSGCGACYQVRCKIPQYCDEDGAYVVATDYGEGDRTDFVMSPRGYSGLGRNEDASAELFKYGVVDVEYRRVPCRYDYNIAFKVHEHSKRPEYFAVAILFVGGTYDVNAAQIWQEDCQEWRGMRRAFGGVFDYANPPSGELTLRVQVSGSAGVYWVQPKNAIPSDWTAGATYDSEVQLT* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1314 250 Gene3D - 20 146 IPR036908 -
Dod05g1314 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Dod05g1314 250 Gene3D - 147 249 IPR036749 -
Dod05g1314 250 PANTHER EXPANSIN-B3 4 249 - -
Dod05g1314 250 SUPERFAMILY Barwin-like endoglucanases 13 148 IPR036908 -
Dod05g1314 250 Pfam Lytic transglycolase 63 140 IPR009009 -
Dod05g1314 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 245 IPR007117 -
Dod05g1314 250 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Dod05g1314 250 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Dod05g1314 250 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Dod05g1314 250 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Dod05g1314 250 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 249 - -
Dod05g1314 250 SUPERFAMILY PHL pollen allergen 150 245 IPR036749 -
Dod05g1314 250 Pfam Expansin C-terminal domain 151 234 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1314 Dod-Chr5 36850028 36852673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1314 1 250 Expansin Gene Family AT4G17030 59.921 3.52e-111 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1314 - - gmx:100779487 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0923 02 11828943 11831522 Dod05g1314 05 36850028 36852673 PCT