Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1294 ATGAACTGTTTCTTCTTCAAGGAGAAGTGCAAATCTGCCCCTGAGTTGGAGCAGAATAACCGAGGGAAGAACAAGAAGAAGAACCCTGCTGTGAACCGCGCTGCAAACTCCACTGGCTCCATATCATCACCAAGGAGCGTGAAGGAACTGTACAAGGAGAAAGAGCACAACTTCAGAGTTTTCACTTTGCAGGAGCTGAGAGATGCCACAAGCGGTTTCAACAAGATGCTGAAGCTTGGTGAAGGGGGTTTTGGGAGTGTGTATAAAGGGTCCATTAGGCCTCAAGATGGAGGACAAGGTGACCCAATTGTGGTTGCTGTCAAAAGGCTCAACACGCGTGGCTTCCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTCAGTCACCCAAATTTGGTTAAGCTTTTGGGATACTGCTGTGTAGATGGAGAAAGAGGAATCCAACGGCTGTTGGTGTATGAGTTCATGCCCAACAGGAGCTTGGAAGATCACCTCTTCAATAAAGCTCTTCCCGTCCTTCCTTGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTGGATTATCTACATGAGGGACTGGAAATTCAGGTGATCTACCGAGATTTCAAATCTTCAAATGTTTTATTGGATGAGAATTTCTACCCAAAGCTATCAGATTTTGGTCTTGCTAGGGAAGGTCCACAAGGTGATCAGACTCATGTGTCTACTGCGGTAGTTGGGACTCAGGGCTATGCTGCCCCTGAGTATATTGAAACAGGTCATCTCAAAGTTCAGAGTGACATGTGGAGTTTCGGCGTTGTACTCTACGAGATCCTCACAGGAAGGCGATCGCTGGAAAGAAACCGTCCACCGCCAGAACAGAGACTACTGGATTGGGTTAAACAGTATCCTGCTGACAGCAACAGATTCAACATGATAATGGATCTGCGGCTCAGGAACCAATACCCTCTTGCTGCAGCTCGCAAAGTAGCCAAGTTGGCTGACAGCTGCTTAAGGAAGAATCCTGAAGATAGACCGTCCATGAGTCAGATAGTGGAAAGCCTGAATCACGCATTGCAAATTTCGGAAATGACGAGCACTTCTCAGAATCCTGGCGAATCGTCTCGGTCTAGATTGGTCCGAAAAGGTAAATAG 1155 0.4675 MNCFFFKEKCKSAPELEQNNRGKNKKKNPAVNRAANSTGSISSPRSVKELYKEKEHNFRVFTLQELRDATSGFNKMLKLGEGGFGSVYKGSIRPQDGGQGDPIVVAVKRLNTRGFQGHKEWLAEVQFLSIVSHPNLVKLLGYCCVDGERGIQRLLVYEFMPNRSLEDHLFNKALPVLPWKTRLEIMLGAAQGLDYLHEGLEIQVIYRDFKSSNVLLDENFYPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPPPEQRLLDWVKQYPADSNRFNMIMDLRLRNQYPLAAARKVAKLADSCLRKNPEDRPSMSQIVESLNHALQISEMTSTSQNPGESSRSRLVRKGK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1294 384 MobiDBLite consensus disorder prediction 15 45 - -
Dod05g1294 384 SUPERFAMILY Protein kinase-like (PK-like) 55 355 IPR011009 -
Dod05g1294 384 ProSitePatterns Protein kinases ATP-binding region signature. 79 108 IPR017441 GO:0005524
Dod05g1294 384 CDD STKc_IRAK 79 356 - -
Dod05g1294 384 MobiDBLite consensus disorder prediction 363 384 - -
Dod05g1294 384 PANTHER OS01G0588500 PROTEIN-RELATED 20 380 - -
Dod05g1294 384 Gene3D Phosphorylase Kinase; domain 1 47 159 - -
Dod05g1294 384 ProSiteProfiles Protein kinase domain profile. 73 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1294 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Dod05g1294 384 MobiDBLite consensus disorder prediction 30 45 - -
Dod05g1294 384 Pfam Protein tyrosine and serine/threonine kinase 77 355 IPR001245 GO:0004672|GO:0006468
Dod05g1294 384 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 20 380 - -
Dod05g1294 384 Gene3D Transferase(Phosphotransferase) domain 1 160 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1294 Dod-Chr5 36486855 36490634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1294 1 355 Glycoside Hydrolase AT3G07070 42.466 1.05e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod05g1294 PK_Tyr_Ser-Thr 4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1294 - K00924 adu:107483795 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1294 05 36486855 36490634 Dod05g1294 05 36486855 36490634 ECH
Dod02g0906 02 11672139 11676266 Dod05g1294 05 36486855 36490634 PCT