Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1252 ATGGGTTGCTTACACTCAAAAACCGCTCATCTTCACTCTCCTGAAGACCCTCCCACAGACTTACCAGACCCCAACAAGCCCGATCCAGTTGATGGGGTTGGTGGGGATCATGAAGAGAGTGATGTTCCGGCATTCAAAGAGTACAGTCTGAGTGAACTCAGAAGGGCCACAAATGAGTTCAGTGCAAATAACATTGTTTCTGAGAGTGGTGAGAAAGCTCCAAACGTGGTTTACAAGGGGAAGCTAGAGAACAATCAGTTGGTTGCTGTTAAGCGATTCTCCAAAGTGTCTTGGCCTGATGCTCAACAGTTCATGGTAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTGATTGGTTGTTGTGCTGAAGGAGATGAACGGCTCTTGGTAGCTGAGTACATGCCAAATGATACTTTGTCCAAGCATCTCTTTCATTGGGACAAGCAACCATTACCGTGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCTCAGGCACTGGATCGTTGTAGCATGGAAAACCGGAAAATATATCATGATCTGAATGCGTATAGGATTCTTTTTGATGAGGATGGTGATCCCCGTTTATCAAGTTTTGGGCTTATGAAAAATAGTCGTGATGGGAAAAGCTACAGTACTAATCTAGCTTATACCCCACCTGAATTTTTGCGAACAGGCAGGATAATCCCAGAGAGTGTGATCTACAGTTATGGAACTGTTCTTCTGGATCTTTTGAGTGGCAAGCATATTCCTCCGAGCCATGCTCTGGACCTGATTAGAGGGAAAAATGTATTGATGTTGATGGACTCATCACTAGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAGTGTCTTCAGTTTGAGGCTAGAGAACGACCTGATATTAAGTTCCTTCTTACTGCAGTTACACCCCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTAATGGGCCTTACTAAAAATACACAAGTGCTTCCGACCATGCTTTCTCCTCTTGGAAAGGCTTGTGTAAGGATGGATCTTACTGCTGTGCATGATATTTTGTTAAAAACTGGTTATAAAGACGAAGAAGGTGCAGAAAATGAGCTTTCTTTCCAAGAGTGGACACAACAAGTGCAAGACATCTTGAACACAAAAAAGTTTGGGGATATTGCATTTAGAGACAAGGACTTCAAAAATGCAATTGAGTATTACTCTAAGTTGGTGGTTATGATGTCTGTCCCTTCTGCAACTGTCTTCGCAAGGAGATCCTTCTCCTACTTGATGAATGATCAGGCAGAACTCGCATTAAGGGACGCCATGCAGGCGCAGGTATGCATATCCGATTGGCCAACTGCGTTCTACCTGCAGGCACTTGCTCTCTCAAAGCTGGGAATGGACACTGATGCTCAGGACATGCTTAATGATGGGGCAGCCTTCGAGGCAAAGAGATCTAACAGCTGGCGCGGCTAA 1491 0.4453 MGCLHSKTAHLHSPEDPPTDLPDPNKPDPVDGVGGDHEESDVPAFKEYSLSELRRATNEFSANNIVSESGEKAPNVVYKGKLENNQLVAVKRFSKVSWPDAQQFMVEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDRCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLMLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVTPLQKQKEVASHVLMGLTKNTQVLPTMLSPLGKACVRMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRSFSYLMNDQAELALRDAMQAQVCISDWPTAFYLQALALSKLGMDTDAQDMLNDGAAFEAKRSNSWRG* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1252 496 SUPERFAMILY TPR-like 387 485 IPR011990 GO:0005515
Dod05g1252 496 Gene3D Tetratricopeptide repeat domain 386 495 IPR011990 GO:0005515
Dod05g1252 496 MobiDBLite consensus disorder prediction 1 43 - -
Dod05g1252 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 495 - -
Dod05g1252 496 Pfam Protein tyrosine and serine/threonine kinase 76 311 IPR001245 GO:0004672|GO:0006468
Dod05g1252 496 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Dod05g1252 496 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1252 496 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Dod05g1252 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 495 IPR045845 GO:0004672|GO:0009742
Dod05g1252 496 SUPERFAMILY Protein kinase-like (PK-like) 42 315 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1252 Dod-Chr5 35517672 35523505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1252 36 314 Glycoside Hydrolase AT3G07070 34.768 8.17e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dod05g1252 PK_Tyr_Ser-Thr 4.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1252 K14500 - gmx:100793576 932.554