Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1246 ATGAAAGTAATGAGCTTTTCTGGTGGCATTACAAAACCCAGTTTTTTGTTTGCTCAAACTGAAATGCCTATTCTAGCATGTGGTCATTCTAAGTTGAGTGCCTCATTGGCTCTTGGGTTGCCACGTAACTGTGTGAGGAGGATGGGGTTAGTTACAAAGCTTCAATATTCTGTTGCTGATAGGACATTGGCTTCTAGTTCTGTGGAGTCGCCAGCATCCAAACCGGAGTCCAGTCCAGTGAGTAGGAGGCGGGGAGGCGGCTCATCGTTATATAGTCGTCCTAGTTTGTCCATACTGAAGAACAATAGGGAGGAGATGCGGGAAAAGGTTTATGAATTCTTGCGGGGAATTGGCATTGTTCCTGATGAGCTTGATGGTCTTGAACTTCCTGTGACAGTGGAGGTTATGAGGGAACGCGTAGATTTTCTTCACAGTTTGGGGCTTACAATCGAAGACATTAACAACTATCCACTTGTTCTTGGCTGCAGTGTGAAGAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTCAGGAATTCCACATTCACTCAATTTTTGTGGAGATACCCACAAGTGCTCCATGCTAGTGTGGTTGTAGATCTTGTACCAGTTGTCAAGTATCTTCAGGGGATGGATATAAAGCCCAATGATATTCCTCGTGTTCTTGAGAGGTACCCTGAAGTGCTGGGATTCAAGCTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGGTTGGAATTGGTGTATCAAGAAGGGAAATTGGTGGTGTCTTAATTAGAAACCCGGATATTCTAGGGATGCGAGTTGGTAGAATCATCAAGCCTTTTGTGGAATTTCTGGAAAGCCTGGGAATTCTAAGGTTGGCTATTGCTAGATTGATAGAGGAAAGACCTTATATTCTTGGATTTGGCCTGGATGAGAAGGTGAAGCCAAATGTGAAATCCCTTGAAGAGTTTAATGTTAGGCAAACATCACTTCCCTCTATAATTGCTCAGTATCCTGACATCATTGGAACTGACTTAAAGCCAAAGCTTGTCAATCAGAGAAATTTACTCAACTCTGTACTTGGTGTGGACCCTAAGGATTTTGGCAGACTTGTTGAGAAGATGCCACAGGTAGTTAGCCTCGGTTGTGAACCTATGCTGAAGCACATTGATTTTCTTAAGGATTCTGGATTTTCCTTGGAGCAAATGAGGAAGATGATCGTTGGATGCCCTCAGCTTCTTGCTTTAAACATTGACGTTATGAAACTTAGCTTTGATTACTTCCACATGGAGATGAAGAGGCCTTTGGAAGACTTGGTTATTTTCCCCAGCATTTTTCACCGAATGGATTATGACACTATTGACATGGAAGAGATGGAAATGGAACCATCATTTGACATGAATTCACTGATGCAACCAAGGGATGACAAATCGGGTTCTGATTATGAAGACAGTGGTGATGATGGTTAG 1464 0.4269 MKVMSFSGGITKPSFLFAQTEMPILACGHSKLSASLALGLPRNCVRRMGLVTKLQYSVADRTLASSSVESPASKPESSPVSRRRGGGSSLYSRPSLSILKNNREEMREKVYEFLRGIGIVPDELDGLELPVTVEVMRERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRNSTFTQFLWRYPQVLHASVVVDLVPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREIGGVLIRNPDILGMRVGRIIKPFVEFLESLGILRLAIARLIEERPYILGFGLDEKVKPNVKSLEEFNVRQTSLPSIIAQYPDIIGTDLKPKLVNQRNLLNSVLGVDPKDFGRLVEKMPQVVSLGCEPMLKHIDFLKDSGFSLEQMRKMIVGCPQLLALNIDVMKLSFDYFHMEMKRPLEDLVIFPSIFHRMDYDTIDMEEMEMEPSFDMNSLMQPRDDKSGSDYEDSGDDG* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1246 487 MobiDBLite consensus disorder prediction 65 89 - -
Dod05g1246 487 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 69 444 - -
Dod05g1246 487 PANTHER CGI-12 PROTEIN-RELATED 69 444 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 SMART mt_12 367 397 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 SMART mt_12 330 362 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 Pfam mTERF 172 445 IPR003690 GO:0003690|GO:0006355
Dod05g1246 487 MobiDBLite consensus disorder prediction 463 487 - -
Dod05g1246 487 Gene3D Transcription termination factor 3, mitochondrial 274 452 IPR038538 -
Dod05g1246 487 Gene3D Transcription termination factor 3, mitochondrial 95 202 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1246 Dod-Chr5 35438627 35441473 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod05g1246 mTERF 1e-82 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1246 K15032 - gmx:100785223 701.434