Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1245 ATGGGAAGTGGAGTCTCTACCCTGTGCTCCTGCCTCGCCGAACCGGCGGCGAACCGGACCAACGAACCGGACAACCAGGACGTGATCTTCGCCGCCACGGAGCCACTCGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCCTCCGCCCGCTTCCTCTCTCCCACCCACTCCGATCGCTTCGTCTCCCCTTCGACCTCCCTCCGCTTCTCCCCGACCCATGACCCGCTCCCCAAGACCCGACCCGACCCGCCCGAGACCGGCTTCAAGGCCATTTCCGGAGCCTCCGTCAGCGCCAACAGCTCCGTCCCCAGGGCCGTTATTCAGTTAGACGAAGAGGCCGCCGATTGTACCTCGAACAGGGGACCAGCTGGGGGGACCGTTGTGAACGGTTTCGAGAGCAGCTCGTCGTTTAGCGCCTTACCGCTCCAGCCGGTTCCCCGAGGGGGCGAACCTTCTGGAAACTTCGAGAGGGGAGGATTCTTCCTCTCCGGCCCAATCGAGAGTGGCGCGCTCTCCGGCCCGCTCAACGCTGGCGGCGCCGCCGCCGAAGGAGCCGCCGGCGGTGGTGTTCCGTTCTCGGCGCCGCTTGGAGGGGTGTACGTGAGGAAGAAGAGGAAGAAGGGTGTGTCGGGGTTCAGGAAGGCGTTTCAGAGGAGTGCGCCGGAGAAGAAGCGGCCGTGGGTGGTTCCGGTGCTGAACTTCGTCGGGAGGAAGGAGGTTCCGGCTAGCGAGGGGACGGCCGTTCCAGCGGCGGCGGAGGTGGATGCGGGGCCGAGGGGGGAGAGCAATGTGCAGTGGGCGCTGGGGAAGGCGGGCGAGGATAGGGTCCACGTGGTGGTGTCGGAGGAGCAAGGGTGGCTGTTCGTTGGGATTTACGACGGTTTCAACGGTCCTGACGCGCCGGAGTTTCTGATGGGCCAACTCTACCGCGCCGTCCACAACGAGCTCCAGGGATTGTTCTGGGAAGCCGAAGGACCAGACGACAGTAACGCTTCGAGTGTTCCGGCAGCTGAAACTGCAGTGGTTGGTGATGGTGCTGCTGAGGTGAAGAACAATGAGGGAGGTGGCGGAGGAGAAAGCTCTGCGGCGGCGGTGGTGGTGAAGAAGGTGACGTTTCAGGCGGATGGAACGGAGAGTAGGAGGCGCAGGCTATGGGAGTTTCTCGCTGAGGACCCGGAAGACGGCCTTGACCTTTCGGGCTCTGATAGGTTCGCGTTTTCTGTCGATGATGCTCTCAGCGTTAGCAATGCCAGTGCTGGCTCAGCGGTTAGCAGAAGGTGGCTGCTGTTATCGAAGTTGAAGCATGGGTTGTCGAAGCATAATCACGGTAGGAAGTTGCTGCCGTGGAGTTTCGGCACAACCGAGGGGAAGGGGAAGGTGGAGACGGTGGAGGCGGAGAACCGGCCGGAGGAGAAGTCTTCCAGTGGCGGCGGCGGAGGCGCTGGTGGTGGTGGCAGGAAGCGGAAGCTTGGTCCAGTGGATCATGATCTGGTTCTGAGGGCATTGTCTCGGGCGCTTGAGGTGACTGAGCTTGCATACTTGGATATGACGGATAAGCTTCTTGATACTAATCCGGAACTTGCTTTGATGGGTTCGTGTTTGTTGGTTGCTTTGATGAGGGATGAAGATGTGTATGTGATGAATGTTGGGGATAGCCGTGCTATTGTAGCACACTATGCGCCCAAAGAGGGTGCTGCTAGTGTGGAATCGGGAAGCAAGGGGGATGTTGGGTCGAGCACGGAGAGCATAGTGGAGGAGTCCTTAGCTTTAGGAGAAGGTGAAGGTGCAGGCAAGTTGGGTAATGAGGGGCATGCTCAAGAAATGAGGTTGGTGGCTTTGCAGCTCTCCACTGACCACAGCACCAGCATTGAAGAAGAAGTCATTAGAATTAAGAATGAGCACCCTGATGATGCCCAATGTATAGTCAATGATAGAGTAAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGCAGTATTAGAAATGTTCCGTAATGAATATATTGGCACTGCTCCATATATATCCTGTTCTCCTTCACTACGTCACCACAGATTATGCCCGAGAGATCAGTTCTTGATCCTGTCATCTGATGGGTTATATCAATATTTAAACAATGAAGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGAAGGTGATCCTGCTCAACATTTAATCGAAGAGCTGCTTATTCGTGCTGCCAAGAAAGCTGGAATGGATTTTCATGAGTTGCTGGATATCCCCCAAGGAGACCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCATCCGGGAAGTATCTGTGA 2385 0.5618 MGSGVSTLCSCLAEPAANRTNEPDNQDVIFAATEPLDETLGHSFCYVRSSARFLSPTHSDRFVSPSTSLRFSPTHDPLPKTRPDPPETGFKAISGASVSANSSVPRAVIQLDEEAADCTSNRGPAGGTVVNGFESSSSFSALPLQPVPRGGEPSGNFERGGFFLSGPIESGALSGPLNAGGAAAEGAAGGGVPFSAPLGGVYVRKKRKKGVSGFRKAFQRSAPEKKRPWVVPVLNFVGRKEVPASEGTAVPAAAEVDAGPRGESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGQLYRAVHNELQGLFWEAEGPDDSNASSVPAAETAVVGDGAAEVKNNEGGGGGESSAAAVVVKKVTFQADGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNASAGSAVSRRWLLLSKLKHGLSKHNHGRKLLPWSFGTTEGKGKVETVEAENRPEEKSSSGGGGGAGGGGRKRKLGPVDHDLVLRALSRALEVTELAYLDMTDKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYAPKEGAASVESGSKGDVGSSTESIVEESLALGEGEGAGKLGNEGHAQEMRLVALQLSTDHSTSIEEEVIRIKNEHPDDAQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNEYIGTAPYISCSPSLRHHRLCPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELLIRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1245 794 SUPERFAMILY PP2C-like 272 783 IPR036457 -
Dod05g1245 794 Gene3D - 255 415 IPR036457 -
Dod05g1245 794 ProSiteProfiles PPM-type phosphatase domain profile. 260 782 IPR001932 -
Dod05g1245 794 MobiDBLite consensus disorder prediction 460 491 - -
Dod05g1245 794 Gene3D - 421 789 IPR036457 -
Dod05g1245 794 CDD PP2Cc 496 782 IPR001932 -
Dod05g1245 794 MobiDBLite consensus disorder prediction 64 87 - -
Dod05g1245 794 SMART PP2C_4 259 780 IPR001932 -
Dod05g1245 794 Pfam Protein phosphatase 2C 615 749 IPR001932 -
Dod05g1245 794 PANTHER PROTEIN PHOSPHATASE 2C 22 792 IPR015655 GO:0004722|GO:0006470
Dod05g1245 794 PANTHER PROTEIN PHOSPHATASE 2C 29 22 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1245 Dod-Chr5 35418080 35424549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1245 1 794 PP2C-type Phosphatase Gene Family AT2G35350 55.822 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1245 - - mtr:MTR_4g098650 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0873 02 11207311 11211845 Dod05g1245 05 35418080 35424549 PCT