Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1243 ATGGCTGGAAAGTTCGTTCTAATCAACGATTTGAACAGCAGTAATGACAATAAGTTCTGGAAAATGAAAGTAAGAGTGATCAAGTTGTGGAAGAAATCTACTTTTGTTACTGTTGGAACTGTCAAAGAGGTAGATGACACATCTAACTGGTGGTACAAGGGCTGCAAAAAATGCTTCCAGGGTTTGATGGAGCTTAGCAATTCATTTTACTGTAAGAAATGTAAAACATATCCAACAACTTTTGTTCCTAGGTATAGGATTAAAGTAAAGGTGGCTGATGAGACTGGGACTGCCTCATTTAACATTTTTGATAAAGAAGCTTCAAAGTTCTTGAATGTGTCTGCCAATGACTTAAGGGCCTCTTATATTAAGAAGGGAGGAGATAAGAAACAATACCCTGAAGAACTCATTGCTTTCAAGGATAAGAAATTTATTTTCAAGGTTTCTGTAAAGGTTGAAGATTTGAATTCATTTCAACCTTGTGTGATAAATGTCATGAGGATTTGTTCTGATGAGTCTATAATTACTTCTTTTGTTCAAAAGCACAAAATAGATGAGGTATGTTATGATCAGTGTTGTCATTTATATTTAGTTTCAGGACTTTCATATGTTAACTTGGACTTTTGGTCCCAATCATTTGAAGTAGGGACAGAATCAGAAGCTAGAACATCAATTACTCCAACAACTAAGAAGGGTGACAAAGATTGGGAAGCTCAGCCTTCTCAAACATTAGTAGACGATTCTGAACAATCATCCACAAAGCTGAGAAAGGTTATGAAGAAACCTGAGGAGTAA 795 0.3572 MAGKFVLINDLNSSNDNKFWKMKVRVIKLWKKSTFVTVGTVKEVDDTSNWWYKGCKKCFQGLMELSNSFYCKKCKTYPTTFVPRYRIKVKVADETGTASFNIFDKEASKFLNVSANDLRASYIKKGGDKKQYPEELIAFKDKKFIFKVSVKVEDLNSFQPCVINVMRICSDESIITSFVQKHKIDEVCYDQCCHLYLVSGLSYVNLDFWSQSFEVGTESEARTSITPTTKKGDKDWEAQPSQTLVDDSEQSSTKLRKVMKKPEE* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1243 264 CDD RPA1_DBD_C 31 156 IPR013955 -
Dod05g1243 264 PANTHER BNAC07G49340D PROTEIN 36 218 - -
Dod05g1243 264 Pfam Replication factor-A C terminal domain 36 168 IPR013955 -
Dod05g1243 264 MobiDBLite consensus disorder prediction 250 264 - -
Dod05g1243 264 PANTHER REPLICATION FACTOR A 1, RFA1 36 218 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Dod05g1243 264 MobiDBLite consensus disorder prediction 222 264 - -
Dod05g1243 264 Gene3D - 8 177 IPR012340 -
Dod05g1243 264 SUPERFAMILY Nucleic acid-binding proteins 31 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1243 Dod-Chr5 35365139 35367587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1243 51 157 Core DNA Replication Machinery Family AT5G08020 29.630 6.25e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1243 - - aip:110264975 192.586