Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1242 ATGGGAGGGGCATCATTGCCACCAGGATTTCGTTTCCATCCAACAGATGAAGAACTAGTGGGATACTACCTTAAAAGAAAAGTGGAGGGGCTTGAAATTGAGCTTGAGGTCATCCCCGTGATTGATTTGTACAAATTCGATCCATGGGAATTGCCTGAGAAATCATTCCTGCCAAAACGAGATTTGGAGTGGTTTTTCTTTTGTCCAAGGGACCGCAAGTACCCAAATGGATCAAGGACAAACAGAGCCACCAAAGCTGGTTACTGGAAAGCCACTGGAAAGGACAGGAAAGTGGTGTGCCAGTCTTCTGCTACTCCTTCCACTGTCACAGGTTACCGCAAGACCCTGGTTTTCTATCGTGGGAGGGCACCTTTAGGCGATAGAACTGACTGGGTCATGCATGAGTATCGCCTCTGTGATGATCTTGGCCAAGGCTCGCCATGTTTCCAGGGTGGTTTTGCTTTGTGCCGAGTTTTCAAGAAGAATGAGAAGGTAAATGATTCGCAGGGAGAACAGAAGGGCAAAAGGGCTGGAAGCAGTTCCATCAATGGGAGTGACACATCAATGAGGTTCTCTAGTGAGCCATTAACCATTTCTGCTGATGTTTCCTCTCAAGCAAGTCACATGAACAGTGAAAGCCGTCATTCCAGCCCCATTACTTCTCCACACAATGTAACTCCAGTGCTAGAGTCCAACCAAGCTTCCGTGGACACAAATACTTCAGACTTTTGGATCTCTCCTGATATGATTCTCGACTCTTCAAAGGACTATCCTCAAGTACAAGATGCTTATCAGCAGTATGACTTACGTAGTACGATGACTTCATGGCAATCAATGGACCATACAGAAATTTCTACTAGCTCAACATACTCAAATTTTAATGGGGAAGTTGAATTTTCTGATGATCTCAGTCGGATTGGCTGCATGTCAACTTATTCAGGACAAGGGAATTTCATGGACTTTTATGGGAATGGAGATGTTCCTTATGGATGTTATGATCAGATTAATTCAACTGGATACCCAGAATACTTCTGA 1035 0.4454 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSSATPSTVTGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLGQGSPCFQGGFALCRVFKKNEKVNDSQGEQKGKRAGSSSINGSDTSMRFSSEPLTISADVSSQASHMNSESRHSSPITSPHNVTPVLESNQASVDTNTSDFWISPDMILDSSKDYPQVQDAYQQYDLRSTMTSWQSMDHTEISTSSTYSNFNGEVEFSDDLSRIGCMSTYSGQGNFMDFYGNGDVPYGCYDQINSTGYPEYF* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1242 344 MobiDBLite consensus disorder prediction 172 226 - -
Dod05g1242 344 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Dod05g1242 344 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Dod05g1242 344 Pfam No apical meristem (NAM) protein 7 138 IPR003441 GO:0003677|GO:0006355
Dod05g1242 344 Gene3D NAC domain 15 166 IPR036093 GO:0003677|GO:0006355
Dod05g1242 344 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 344 - -
Dod05g1242 344 MobiDBLite consensus disorder prediction 164 226 - -
Dod05g1242 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1242 Dod-Chr5 35317330 35320284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1242 1 298 NAC Transcription Factor Family AT4G17980 55.150 3.27e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod05g1242 NAM 4.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1242 - - gmx:100792714 571.237