Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1227 ATGGCTGGTTTAGATTTAGGCACAGCATCACGCTTCGTTCAGAACCTTCACAGACCAGACTTGCACCTTCAACACCACCACCACCACCAACACCACCCCAATTCCCAAGATCAACAAGAAACCCCAAACCGTGCAGGTGCAGATGCACCCCAATTCTCCACCGAAGAAGATGATCCCAACCAAGGCGGCGGCCTGGAGCTAGGCTCCATCCTCCGCCGGCGACGTCGGAGGCCGTCGCCCTCGCGGCCGCCCAGCAGGCTCAAAAAACAAGCCCAAGCCGCCCCGTCGTCTGCCTACGCGCGGCGGCGCCAGCGCGGGATCTGCATCCTCAGCGGCAGCGGCACCGTCACCAATGTCAGCCTCCGACAGCCTGCGGCGGCCGGCTCCGTCGTCACGCTTCACGGCCGGTTCGAGATTCTGTCCCTGACCGGGTCGTTTCTGCCGCCGCCAGCGCCACCTGGAGCGACTAGCCTTACGATATACCTAGCCGGCGGGCAGGGGCAGGTTGTAGGGGGCAGCGTCGTCGGGGAGTTGACGGCGGCCGGGCCCGTGATCGTCATCGCGGCGTCGTTCACCAACGTGGCTTACGAGCGGCTGCCGCTGGAGGAGGAGGAGGAGCAGCTCCAGATGCAGCCGCCGGCGGCCCCCTCGGCGTCTCAGGGCTCCGGGGGCGGCGGTGGTGTTGGGAGCAACAACAACCCTTTTCCTGACCCTTCTTCTGGTTTGCCGTTCTTCAATTTGCCGCTTGGTATGCAGAGTGTTCAGTTGCCATTGGATGGTACTTGGGCGGGAAACTCGGGTGCGCGCCCTCCATTTTGA 819 0.6374 MAGLDLGTASRFVQNLHRPDLHLQHHHHHQHHPNSQDQQETPNRAGADAPQFSTEEDDPNQGGGLELGSILRRRRRRPSPSRPPSRLKKQAQAAPSSAYARRRQRGICILSGSGTVTNVSLRQPAAAGSVVTLHGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEEEEQLQMQPPAAPSASQGSGGGGGVGSNNNPFPDPSSGLPFFNLPLGMQSVQLPLDGTWAGNSGARPPF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1227 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 97 272 IPR014476 GO:0003680
Dod05g1227 272 Gene3D - 96 212 - -
Dod05g1227 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 208 - -
Dod05g1227 272 MobiDBLite consensus disorder prediction 203 246 - -
Dod05g1227 272 MobiDBLite consensus disorder prediction 36 58 - -
Dod05g1227 272 MobiDBLite consensus disorder prediction 24 100 - -
Dod05g1227 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 193 IPR005175 -
Dod05g1227 272 CDD DUF296 98 163 IPR005175 -
Dod05g1227 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 97 272 - -
Dod05g1227 272 MobiDBLite consensus disorder prediction 212 239 - -
Dod05g1227 272 ProSiteProfiles PPC domain profile profile. 73 214 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1227 Dod-Chr5 34988813 34989711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1227 1 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 52.050 7.53e-72 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1227 - - vvi:100262516 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0864 02 11119837 11121738 Dod05g1227 05 34988813 34989711 PCT